Sphingomonas sp. Leaf343

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf343 is characterized as a rod-shaped bacterium, a morphological trait that is common among various members of the Sphingomonadaceae family. This organism possesses flagella, which suggests the capability for motility, allowing it to navigate its environment effectively. Genomic analysis reveals that Sphingomonas sp. Leaf343 has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its ecological niche. The strain is cataloged under the accession number LMPG00000000.1, which provides a reference for its genomic data within biological databases. The presence of flagella in Sphingomonas sp. Leaf343 may play a significant role in its ecological interactions, particularly in soil and plant environments where it has been isolated. This motility can enhance its ability to colonize surfaces and access nutrients, potentially contributing to its role in biogeochemical cycling. Understanding the motility and genetic characteristics of this bacterium could shed light on its ecological functions, such as its interactions with plant systems and its potential applications in bioremediation or phytoremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf343
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf343
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf343 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

591702 bp

Thymine Count

592426 bp

Guanine Count

1206102 bp

Cytosine Count

1209769 bp

Genome Length

3600029 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endo alpha-1,4 polygalactosaminidaseASG07_12090Not AvailablePositive2780563 - 278142930891.0
hypothetical proteinASG07_12095Not AvailablePositive2781486 - 27817709691.83
hypothetical proteinASG07_12100Not AvailableNegative2781776 - 278221915624.9
hypothetical proteinASG07_12105Not AvailablePositive2782750 - 278320816791.1
hypothetical proteinASG07_12110Not AvailablePositive2783319 - 278368413618.2
trna (uracil-5-)-methyltransferaseASG07_12115Not AvailablePositive2783767 - 278513749284.5
histidine kinaseASG07_12120Not AvailableNegative2785070 - 278553116393.2
hypothetical proteinASG07_12125Not AvailableNegative2785586 - 278626024130.1
hypothetical proteinASG07_12130Not AvailablePositive2786326 - 278686819619.9
hypothetical proteinASG07_12135Not AvailablePositive2786868 - 278740420319.6

Displaying genes 2551 – 2560 of 3295 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.