Sphingomonas sp. Leaf343

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf343 is characterized as a rod-shaped bacterium, a morphological trait that is common among various members of the Sphingomonadaceae family. This organism possesses flagella, which suggests the capability for motility, allowing it to navigate its environment effectively. Genomic analysis reveals that Sphingomonas sp. Leaf343 has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its ecological niche. The strain is cataloged under the accession number LMPG00000000.1, which provides a reference for its genomic data within biological databases. The presence of flagella in Sphingomonas sp. Leaf343 may play a significant role in its ecological interactions, particularly in soil and plant environments where it has been isolated. This motility can enhance its ability to colonize surfaces and access nutrients, potentially contributing to its role in biogeochemical cycling. Understanding the motility and genetic characteristics of this bacterium could shed light on its ecological functions, such as its interactions with plant systems and its potential applications in bioremediation or phytoremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf343
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf343
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf343 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

591702 bp

Thymine Count

592426 bp

Guanine Count

1206102 bp

Cytosine Count

1209769 bp

Genome Length

3600029 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASG07_04930Not AvailableNegative1293711 - 129453228943.3
dna recombination/repair protein recaASG07_04935Not AvailableNegative1294739 - 129581238206.1
4-diphosphocytidyl-2c-methyl-d-erythritol kinaseASG07_04940Not AvailableNegative1295994 - 129683928431.0
hypothetical proteinASG07_04945Not AvailableNegative1297079 - 129865954499.7
electron transfer flavoprotein-ubiquinone oxidoreductaseASG07_04950Not AvailableNegative1298634 - 130028960232.8
uracil-dna glycosylaseASG07_04955Not AvailablePositive1300410 - 130114125694.8
molybdenum cofactor biosynthesis proteinASG07_04965Not AvailablePositive1303300 - 130382719173.9
dna repair photolyaseASG07_04970Not AvailablePositive1303903 - 130497339617.6
long-chain fatty acid--coa ligaseASG07_04975Not AvailableNegative1305330 - 130691057299.6
dna polymerase iii subunit alphaASG07_04980Not AvailableNegative1306969 - 1310481127752.0

Displaying genes 1141 – 1150 of 3295 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.