Massilia sp. Leaf139

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. Leaf139 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability in various environments. The organism is cataloged under the access number LMOJ00000000.1, facilitating its identification and study within microbial repositories. As a member of the genus Massilia, this bacterium is likely to exhibit traits associated with environmental resilience and versatility. While specific ecological roles or metabolic capabilities of Massilia sp. Leaf139 are not detailed in the data provided, species within this genus are often found in diverse habitats, including soil and aquatic environments. The presence of a single replicon might suggest that Massilia sp. Leaf139 has a simpler regulatory system compared to bacteria with multiple replicons, potentially allowing for rapid response to environmental changes. This trait may enhance its survival in fluctuating conditions, which is a common feature among microorganisms inhabiting varied ecological niches. In summary, Massilia sp. Leaf139, with its Gram-negative status, rod shape, and single replicon, may exemplify the adaptive strategies of bacteria that thrive in diverse ecosystems. Further research on its specific ecological interactions and metabolic pathways could yield valuable insights into its role within its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. Leaf139
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. Leaf139
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. Leaf139 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

935739 bp

Thymine Count

933061 bp

Guanine Count

1764052 bp

Cytosine Count

1754399 bp

Genome Length

5387355 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase large subunitASF77_22385Not AvailableNegative1833377 - 183511064229.6
hypothetical proteinASF77_22390Not AvailableNegative1835046 - 183547414647.8
Putative class i holinASF77_22395Not AvailableNegative1835535 - 183587012485.0
hypothetical proteinASF77_22400Not AvailableNegative1835870 - 183636718348.2
hypothetical proteinASF77_22405Not AvailablePositive1836558 - 18367767984.3
hypothetical proteinASF77_22410Not AvailableNegative1836874 - 183730215854.1
hypothetical proteinASF77_22415Not AvailableNegative1837363 - 18376299840.54
hypothetical proteinASF77_22420Not AvailableNegative1837626 - 18378056800.94
integraseASF77_22425Not AvailableNegative1837892 - 183894738911.3
Replicative dna helicaseASF77_22430Q8X5V3Negative1839010 - 184029946742.2

Displaying genes 31 – 40 of 4620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

271 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 271 metabolites

Health Effects

No health effects information available for this bacterium.