Methylobacterium sp. Leaf104

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. Leaf104 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. This species is noteworthy for its single replicon, indicating a streamlined genomic architecture that may contribute to its adaptability and efficiency in different ecological niches. The accession number associated with Methylobacterium sp. Leaf104 is LMMZ00000000.1, which provides a reference for further genomic studies and comparative analysis within the Methylobacterium genus. Methylobacterium species are commonly known for their role in the methylotrophic metabolism, utilizing methanol and related compounds as carbon and energy sources, which can influence their ecological interactions. In the context of plant-microbe interactions, Methylobacterium species have been documented to inhabit leaf surfaces, suggesting a potential role in plant health and growth promotion. Their presence might contribute to the microbial diversity of phyllosphere communities, impacting nutrient cycling and plant resilience against stressors. This ecological insight highlights the importance of understanding such microorganisms in agricultural and environmental systems, as they may offer beneficial traits for plant growth and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. Leaf104
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. Leaf104
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. Leaf104 contig_9, whole genome shotgun

Gene Summary

Adenine Count

743676 bp

Thymine Count

744706 bp

Guanine Count

1736505 bp

Cytosine Count

1742972 bp

Genome Length

4968001 bp

Protein-coding Genes

4392 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrolaseASF49_18985P42506Positive1385757 - 138635921275.6
protein tyrosine phosphataseASF49_18990Not AvailablePositive1386359 - 138689218761.6
exodeoxyribonuclease vii small subunitASF49_18995A4YQ37Positive1387071 - 13873499954.82
elongation factor tuASF49_19000Q2IXR2Positive1387538 - 138872842885.6
30s ribosomal protein s10ASF49_19005B1LWS5Positive1388918 - 138922611580.2
50s ribosomal protein l3ASF49_19010B1LWS6Positive1389277 - 139001726146.5
50s ribosomal protein l4ASF49_19015B1LWS7Positive1390017 - 139063722520.5
50s ribosomal protein l23ASF49_19020B1LWS8Positive1390634 - 139093010793.2
50s ribosomal protein l2ASF49_19025B1LWS9Positive1390958 - 139179430260.6
30s ribosomal protein s19ASF49_19030B8IS89Positive1391800 - 139207810467.7

Displaying genes 1291 – 1300 of 4456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

289 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 289 metabolites

Health Effects

No health effects information available for this bacterium.