Methylobacterium sp. Leaf93

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. Leaf93 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This organism is notable for having a single replicon, which suggests a streamlined genetic organization that can influence its replication and adaptation processes. The reference genome for Methylobacterium sp. Leaf93 is documented under the accession number LMMS00000000.1, providing a basis for further genetic and functional studies. Methylobacterium species are known for their ability to utilize methanol as a carbon source, which allows them to thrive in various environments, particularly in association with plants. The presence of flagella may enhance their mobility toward favorable niches, potentially promoting symbiotic relationships with plant hosts. These relationships can be ecologically significant as they may influence nutrient cycling and plant growth. In summary, the rod shape and flagella of Methylobacterium sp. Leaf93 facilitate its mobility and adaptation, while its single replicon may contribute to its efficient genomic processes. The ecological implications of its plant-associated lifestyle highlight the importance of Methylobacterium in agricultural and environmental contexts, particularly in enhancing plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. Leaf93
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. Leaf93
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. Leaf93


Gene Summary

Adenine Count

786405 bp

Thymine Count

779065 bp

Guanine Count

1589693 bp

Cytosine Count

1590921 bp

Genome Length

4746437 bp

Protein-coding Genes

4220 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinASF26_19595Not AvailableNegative1618648 - 16188667727.01
hypothetical proteinASF26_19600Not AvailableNegative1618863 - 161920111290.5
Gene transfer aget (gta) orfg9-like phage major tail proteinASF26_19605Not AvailableNegative1619201 - 161960814359.0
hypothetical proteinASF26_19610Not AvailableNegative1619671 - 162011115331.6
head-tail adaptor proteinASF26_19615Not AvailableNegative1620108 - 162045512650.1
5s ribosomal rnaNot AvailableNot AvailablePositive199 - 311Not Available
hypothetical proteinASF26_00005Not AvailableNegative34 - 43214486.1
transposaseASF26_00010Not AvailablePositive500 - 193652883.4
5s ribosomal rnaNot AvailableNot AvailablePositive612 - 727Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive772 - 898Not Available

Displaying genes 11 – 20 of 4282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

278 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 278 metabolites

Health Effects

No health effects information available for this bacterium.