Methylobacterium sp. Leaf85

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. Leaf85 is a rod-shaped bacterium characterized by the presence of flagella, which likely contribute to its motility. This genus is known for its ability to utilize methanol and other one-carbon compounds, playing a significant role in the carbon cycle, especially in environments rich in organic matter. The genome of Methylobacterium sp. Leaf85 contains a single replicon, which is a defining characteristic of many members within this genus. This genomic structure can influence the bacterium's growth and replication dynamics. The accession number for Methylobacterium sp. Leaf85 is LMME00000000.1, indicating its inclusion in genomic databases, which aids in the understanding of its genetic makeup and potential applications. Methylobacterium species are often associated with plant surfaces and can promote plant growth through various mechanisms, including the production of phytohormones. The presence of this bacterium on leaf surfaces suggests a potential symbiotic relationship with plants, where it may contribute to plant health and resilience. In summary, Methylobacterium sp. Leaf85 exemplifies the ecological role of methylotrophic bacteria in terrestrial ecosystems, particularly in their interactions with plants. By utilizing one-carbon compounds, they can enhance soil fertility and plant growth, thereby influencing ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. Leaf85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. Leaf85
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. Leaf85 contig_9, whole genome shotgun

Gene Summary

Adenine Count

849154 bp

Thymine Count

850436 bp

Guanine Count

1720615 bp

Cytosine Count

1722909 bp

Genome Length

5143223 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorASF08_16250Not AvailablePositive668372 - 66883016522.9
pas domain s-box proteinASF08_16255Not AvailableNegative668869 - 671622100136.0
glutamine synthetaseASF08_16260O87393Negative671847 - 67314547964.1
glutamate synthaseASF08_16265O87392Negative673233 - 67459448010.6
protein glxcASF08_16270O87391Negative674594 - 67528324140.6
glutamine amidotransferaseASF08_16275O87390Negative675283 - 67617631537.5
xre family transcriptional regulatorASF08_16280Not AvailablePositive676604 - 67720922047.4
sarcosine oxidase subunit gammaASF08_16285Not AvailableNegative677224 - 67784122200.2
sarcosine oxidase subunit alphaASF08_16290O87386Negative677834 - 680872108216.0
sarcosine oxidase subunit deltaASF08_16295O87387Negative680869 - 68115610630.5

Displaying genes 701 – 710 of 4635 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

264 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 264 metabolites

Health Effects

No health effects information available for this bacterium.