Erwinia sp. Leaf53

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia sp. Leaf53 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This trait suggests an adaptation that may enhance its ability to colonize various environments or interact with plant hosts. The organism has a single replicon, which is a notable genetic feature that can influence its replication and stability in different conditions. The accession number for Erwinia sp. Leaf53 is LMLK00000000.1, which provides a reference for further genomic studies and analysis. This accession encapsulates its genetic information and can be used for comparative research with other Erwinia species, potentially shedding light on evolutionary relationships or functional traits. Understanding the morphology and genetic structure of Erwinia sp. Leaf53 can offer insights into its ecological role. As part of the Erwinia genus, which is often associated with plant pathogenesis, the motility conferred by flagella may play a significant role in its interactions with host plants. This could involve mechanisms of infection or nutrient acquisition, contributing to its survival and proliferation in plant-associated ecosystems. Overall, the traits of Erwinia sp. Leaf53 highlight its potential relevance in ecological dynamics, particularly in relation to plant health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia sp. Leaf53
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Erwinia sp. Leaf53
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia sp. Leaf53 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1043488 bp

Thymine Count

1049508 bp

Guanine Count

1516390 bp

Cytosine Count

1505944 bp

Genome Length

5115519 bp

Protein-coding Genes

4269 genes

Non-Coding Genes

252 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna processing protein dpraASF13_16815P30852Negative633004 - 63412840184.8
peptide deformylaseASF13_16820B2VK93Positive634255 - 63476419247.3
methionyl-trna formyltransferaseASF13_16825B2VK94Positive634788 - 63573534290.4
16s rrna methyltransferaseASF13_16830B2VK95Positive635785 - 63707448128.1
potassium transporter peripheral membrane componentASF13_16835P0A2K0Positive637135 - 63851150552.2
large-conductance mechanosensitive channelASF13_16840B2VK97Positive638634 - 63904715108.9
ribosome rescue factor aASF13_16845P36675Negative639055 - 6393129454.48
zinc-responsive transcriptional regulatorASF13_16850P0ACS6Negative639369 - 63980016433.6
50s ribosomal protein l17ASF13_16855B2VK70Negative639994 - 64038014446.5
dna-directed rna polymerase subunit alphaASF13_16860A4WFA3Negative640421 - 64141036481.9

Displaying genes 771 – 780 of 4521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

323 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 323 metabolites

Health Effects

No health effects information available for this bacterium.