Erwinia sp. Leaf53

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia sp. Leaf53 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This trait suggests an adaptation that may enhance its ability to colonize various environments or interact with plant hosts. The organism has a single replicon, which is a notable genetic feature that can influence its replication and stability in different conditions. The accession number for Erwinia sp. Leaf53 is LMLK00000000.1, which provides a reference for further genomic studies and analysis. This accession encapsulates its genetic information and can be used for comparative research with other Erwinia species, potentially shedding light on evolutionary relationships or functional traits. Understanding the morphology and genetic structure of Erwinia sp. Leaf53 can offer insights into its ecological role. As part of the Erwinia genus, which is often associated with plant pathogenesis, the motility conferred by flagella may play a significant role in its interactions with host plants. This could involve mechanisms of infection or nutrient acquisition, contributing to its survival and proliferation in plant-associated ecosystems. Overall, the traits of Erwinia sp. Leaf53 highlight its potential relevance in ecological dynamics, particularly in relation to plant health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia sp. Leaf53
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Erwinia sp. Leaf53
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia sp. Leaf53 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1043488 bp

Thymine Count

1049508 bp

Guanine Count

1516390 bp

Cytosine Count

1505944 bp

Genome Length

5115519 bp

Protein-coding Genes

4269 genes

Non-Coding Genes

252 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit betaASF13_14320P0A990Negative4581425 - 458252540619.0
chromosomal replication initiation proteinASF13_14325B2VCE3Negative4582528 - 458391952360.7
rnase pASF13_14330Not AvailableNegative4584784 - 45849817106.4
insertaseASF13_14335B2VCE6Positive4585331 - 458697761453.2
trna modification gtpase trmeASF13_14340B2VCE7Positive4587091 - 458845548613.1
fimbria a proteinASF13_14345P13421Positive4589066 - 458959918416.8
hypothetical proteinASF13_14350Not AvailablePositive4589666 - 459021119706.9
fimbrial assembly proteinASF13_14355P77196Positive4590268 - 459280593307.5
molecular chaperoneASF13_14360P77599Positive4592839 - 459358226815.2
hypothetical proteinASF13_14365Not AvailablePositive4593693 - 459425320103.0

Displaying genes 4101 – 4110 of 4521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

323 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 323 metabolites

Health Effects

No health effects information available for this bacterium.