Serratia sp. Leaf50

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia sp. Leaf50 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which indicates its motility. This organism has a single replicon, suggesting that it possesses a streamlined genomic structure. The genomic information for Serratia sp. Leaf50 is catalogued under the accession number LMLI00000000.1, providing a reference for further research and analysis. As a member of the Serratia genus, this bacterium may exhibit traits associated with the broader group, such as the ability to thrive in various environments and potentially interact with plant hosts. The presence of flagella suggests that Serratia sp. Leaf50 may have enhanced mobility, enabling it to colonize different niches more effectively. This motile characteristic could play a significant role in its ecological interactions, including its potential involvement in the rhizosphere or on plant surfaces. Understanding the traits of Serratia sp. Leaf50 can offer insights into its ecological roles, particularly in relation to plant health and soil dynamics. This bacterium's motility may facilitate nutrient acquisition and promote beneficial interactions with plant hosts, contributing to plant growth and resilience. Further research on Serratia sp. Leaf50 could illuminate its specific functions and potential applications in agriculture or biotechnology, particularly in the context of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia sp. Leaf50
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia sp. Leaf50
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia sp. Leaf50 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1316729 bp

Thymine Count

1335997 bp

Guanine Count

1388558 bp

Cytosine Count

1349211 bp

Genome Length

5390593 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione abc transporter substrate-binding proteinASE93_10735Not AvailablePositive3226657 - 322819556466.9
glutathione abc transporter permeaseASE93_10740Q6D3B1Positive3228277 - 322919734155.9
glutathione abc transporter permeaseASE93_10745Not AvailablePositive3229206 - 323012633355.6
s-formylglutathione hydrolaseASE93_10750B1X7P2Negative3230197 - 323105131870.4
lysr family transcriptional regulatorASE93_10755Not AvailableNegative3231063 - 323194432046.7
mfs transporterASE93_10760P39381Positive3232087 - 323321140039.0
gtp cyclohydrolase iASE93_10765A1JU09Positive3233341 - 323400324585.8
hypothetical proteinASE93_10770P25747Positive3234107 - 323524942903.5
transcriptional regulatorASE93_10775P25748Positive3235519 - 323655036992.5
sugar abc transporter substrate-binding proteinASE93_10780P23925Positive3236816 - 323781135861.9

Displaying genes 3081 – 3090 of 4885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

336 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 336 metabolites

Health Effects

No health effects information available for this bacterium.