Sphingomonas sp. Leaf226

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf226 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for Sphingomonas sp. Leaf226 is cataloged under the accession number LMKT00000000.1, providing a reference point for further genetic and biochemical studies. The presence of flagella in Sphingomonas sp. Leaf226 could be significant for its ecological interactions, as motility may enhance its ability to colonize diverse environments, such as plant surfaces or soil. This bacterium is part of the Sphingomonadaceae family, known for its ability to degrade complex organic compounds, which suggests that it may play a role in nutrient cycling and the breakdown of pollutants in its habitat. In summary, the rod shape, motility via flagella, and singular replicon of Sphingomonas sp. Leaf226 highlight its potential ecological roles, particularly concerning its adaptability and function in environmental processes. Understanding the characteristics of this bacterium can contribute to insights into microbial diversity and the ecological dynamics of its native ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf226
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf226
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf226 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

719783 bp

Thymine Count

728295 bp

Guanine Count

1442438 bp

Cytosine Count

1380868 bp

Genome Length

4271556 bp

Protein-coding Genes

3703 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l22ASE77_05315Q2G8X5Positive1567660 - 156803713417.5
30s ribosomal protein s3ASE77_05320A5V5Z6Positive1568037 - 156874426152.9
50s ribosomal protein l16ASE77_05325Q1GPA6Positive1568760 - 156919415934.7
50s ribosomal protein l29ASE77_05330Q5NQ57Positive1569199 - 15694057832.31
30s ribosomal protein s17ASE77_05335A5V5Z3Positive1569416 - 156968810248.4
50s ribosomal protein l14ASE77_05340Q1GPA9Positive1569853 - 157022113303.5
50s ribosomal protein l24ASE77_05345A5V5Z1Positive1570221 - 157053811286.8
50s ribosomal protein l5ASE77_05350A5V5Z0Positive1570531 - 157114523180.2
30s ribosomal protein s14ASE77_05355Q1GPB2Positive1571211 - 157151611644.5
30s ribosomal protein s8ASE77_05360A5V5Y8Positive1571527 - 157192214400.4

Displaying genes 1441 – 1450 of 3787 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

277 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 277 metabolites

Health Effects

No health effects information available for this bacterium.