Sphingomonas sp. Leaf226

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf226 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for Sphingomonas sp. Leaf226 is cataloged under the accession number LMKT00000000.1, providing a reference point for further genetic and biochemical studies. The presence of flagella in Sphingomonas sp. Leaf226 could be significant for its ecological interactions, as motility may enhance its ability to colonize diverse environments, such as plant surfaces or soil. This bacterium is part of the Sphingomonadaceae family, known for its ability to degrade complex organic compounds, which suggests that it may play a role in nutrient cycling and the breakdown of pollutants in its habitat. In summary, the rod shape, motility via flagella, and singular replicon of Sphingomonas sp. Leaf226 highlight its potential ecological roles, particularly concerning its adaptability and function in environmental processes. Understanding the characteristics of this bacterium can contribute to insights into microbial diversity and the ecological dynamics of its native ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf226
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf226
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf226 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

719783 bp

Thymine Count

728295 bp

Guanine Count

1442438 bp

Cytosine Count

1380868 bp

Genome Length

4271556 bp

Protein-coding Genes

3703 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s7ASE77_05265A5V606Positive1559479 - 155994917647.3
elongation factor gASE77_05270Q1GP96Positive1560073 - 156216976888.0
elongation factor tuASE77_05275A5V604Positive1562276 - 156346943055.6
aldehyde-activating proteinASE77_05280Not AvailablePositive1563639 - 156403714346.1
30s ribosomal protein s10ASE77_05285Q1GP98Positive1564261 - 156456911536.1
50s ribosomal protein l3ASE77_05290A5V602Positive1564857 - 156560326361.4
50s ribosomal protein l4ASE77_05295Q5NQ63Positive1565606 - 156623222452.1
50s ribosomal protein l23ASE77_05300Q1GPA1Positive1566225 - 156653911414.8
50s ribosomal protein l2ASE77_05305Q1GPA2Positive1566544 - 156738330781.3
30s ribosomal protein s19ASE77_05310Q1GPA3Positive1567385 - 156766010270.4

Displaying genes 1431 – 1440 of 3787 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

277 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 277 metabolites

Health Effects

No health effects information available for this bacterium.