Sphingomonas sp. Leaf20

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf20 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility in various environments. This species has been identified with a single replicon, indicating a streamlined genetic structure. The complete genome of Sphingomonas sp. Leaf20 is accessible through the accession number LMKN00000000.1. The flagella present in Sphingomonas sp. Leaf20 suggest that it is likely adapted to navigate diverse ecological niches, which may include soil, water, or plant environments. The motility conferred by flagella allows Sphingomonas sp. Leaf20 to interact with its surroundings, potentially influencing microbial community dynamics and nutrient cycling. In terms of ecological significance, members of the Sphingomonas genus are known for their ability to degrade a variety of organic compounds, including environmental pollutants. This trait could position Sphingomonas sp. Leaf20 as a potential player in bioremediation processes, aiding in the breakdown of contaminants and thereby contributing to ecosystem health. Understanding the specific capabilities and ecological roles of Sphingomonas sp. Leaf20 may provide insights into its applications in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf20
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf20
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf20 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

731870 bp

Thymine Count

730769 bp

Guanine Count

1425155 bp

Cytosine Count

1425445 bp

Genome Length

4313322 bp

Protein-coding Genes

3746 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_00946ASE72_04810Not AvailablePositive1063768 - 1064886Not Available
excinuclease abc subunit bASE72_04815Not AvailablePositive1064902 - 10651508881.86
phzf family phenazine biosynthesis proteinASE72_04820Not AvailableNegative1065205 - 106599628499.0
ferrous iron transporterASE72_04825Not AvailableNegative1066022 - 106696934145.1
pyridoxamine 5'-phosphate oxidaseASE72_04830Not AvailableNegative1066966 - 106754421706.1
dna repair proteinASE72_04835Not AvailablePositive1067641 - 106850732217.8
atp-dependent dna ligaseASE72_04840Not AvailablePositive1068615 - 107112290667.6
hypothetical proteinASE72_04845Not AvailablePositive1071305 - 107378888472.2
transglutaminaseASE72_04850Not AvailablePositive1073832 - 107472531941.1
molecular chaperone dnajASE72_04855Not AvailablePositive1074836 - 107574431661.5

Displaying genes 961 – 970 of 3811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.