Sphingomonas sp. Leaf208

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. Leaf208 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This feature may enable the organism to navigate its environment effectively, potentially influencing its ecological interactions and survival strategies. The bacterium possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its surroundings. The genomic data for Sphingomonas sp. Leaf208 is cataloged under the accession number LMKH00000000.1, providing a reference point for further studies and analyses. Sphingomonas species are known for their diverse metabolic capabilities, often thriving in various environments, including soil and water. The ecological role of Sphingomonas sp. Leaf208 could involve participation in biogeochemical cycles, contributing to nutrient cycling and organic matter decomposition. The presence of flagella suggests that this strain may also play a role in colonizing specific niches or interacting with other microorganisms in its habitat. Understanding the traits of Sphingomonas sp. Leaf208 can provide insights into its potential applications in biotechnology, environmental remediation, or agricultural practices. Its motility and metabolic versatility may position it as a significant player in natural ecosystems, further emphasizing the importance of studying such microorganisms to elucidate their roles in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. Leaf208
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. Leaf208
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. Leaf208 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

839634 bp

Thymine Count

834450 bp

Guanine Count

1504050 bp

Cytosine Count

1524999 bp

Genome Length

4703275 bp

Protein-coding Genes

3987 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fuconolactone hydrolaseASE69_19660Not AvailablePositive1441741 - 144259231333.9
d-mannonate oxidoreductaseASE69_19665Q9KFI7Positive1442589 - 144370740726.8
galactonate dehydrataseASE69_19670P42240Positive1443704 - 144520051674.6
tonb-dependent receptorASE69_19675Not AvailablePositive1445667 - 1448678106469.0
hypothetical proteinASE69_19680Not AvailablePositive1448678 - 144895010003.1
glycoside hydrolase family 31ASE69_19685Not AvailablePositive1449023 - 145165696848.6
beta-galactosidaseASE69_19690B9LW38Positive1451768 - 145387078126.6
amino acid permeaseASE69_19695Q9ZU50Positive1454203 - 145577156149.5
hypothetical proteinASE69_03605Not AvailablePositive1456271 - 14564898035.67
50s ribosomal protein l10ASE69_03610Q1GSF8Positive1456766 - 145728117735.5

Displaying genes 1191 – 1200 of 1811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

163 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm0000609D-xylono-1,4-lactoneC5H8O5Chemical structure of D-xylono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.0371734Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da

Displaying 1–10 of 163 metabolites

Health Effects

No health effects information available for this bacterium.