Methanosaeta sp. SDB

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanotrichales

Family

Methanotrichaceae

Genus

Methanothrix

Description

Methanosaeta sp. SDB is a methanogenic archaeon notable for its flagella presence, which is an important trait that may contribute to its motility and ecological adaptability. This organism possesses a single replicon, indicating a streamlined genetic organization that could be advantageous for its survival and reproduction in various environments. The accession number for Methanosaeta sp. SDB is LKUG00000000.1, which serves as a reference for genetic sequencing and further research. The presence of flagella suggests that Methanosaeta sp. SDB may be capable of moving within its habitat, potentially enhancing its ability to locate substrates necessary for methanogenesis. In terms of ecological insight, Methanosaeta species are typically involved in anaerobic digestion processes, playing a crucial role in the conversion of organic matter into methane. Their motility may facilitate interactions with other microbial communities, allowing for more efficient degradation of organic materials in anaerobic environments. This behavior could also impact the dynamics of methane production in ecosystems where Methanosaeta sp. SDB is present, highlighting its significance in biogeochemical cycles and energy flow.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanotrichales
FamilyMethanotrichaceae
GenusMethanothrix
SpeciesMethanosaeta sp. SDB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Methanosaeta sp. SDB scaffold-9997, whole genome shotgun

Gene Summary

Adenine Count

479924 bp

Thymine Count

482270 bp

Guanine Count

665782 bp

Cytosine Count

670616 bp

Genome Length

2298592 bp

Protein-coding Genes

1867 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinAPR56_00440Not AvailableNegative211649 - 21240727716.7
signal transduction proteinAPR56_08690Not AvailableNegative217924 - 21831314027.4
phenylalanine--trna ligase subunit betaAPR56_08695Not AvailableNegative218577 - 22015458469.4
hydrogenaseAPR56_08705Not AvailablePositive220752 - 22174435720.8
hypothetical proteinAPR56_08720Not AvailablePositive223932 - 22451020636.3
cupinAPR56_08725Not AvailablePositive224549 - 22488712551.8
glutathione abc transporter atp-binding proteinAPR56_08735Not AvailableNegative225068 - 22648551919.9
abc transporter permeaseAPR56_08740Not AvailableNegative226488 - 22735131535.0
abc transporter permeaseAPR56_08745Not AvailableNegative227341 - 22833336132.4
hypothetical proteinAPR56_08775Not AvailableNegative231681 - 23241527920.4

Displaying genes 171 – 180 of 1899 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.