Erythrobacter sp. YT30

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Erythrobacter

Description

Erythrobacter sp. YT30 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure typical of many bacteria within its genus. The genomic data for Erythrobacter sp. YT30 is cataloged under the accession number LMAF00000000.1, which provides a basis for further genomic studies and comparative analysis with other members of the Erythrobacter genus. The Erythrobacter genus is known for its role in various ecological niches, particularly in marine environments. Members of this genus are often associated with the phototrophic process, utilizing light for energy, which suggests that Erythrobacter sp. YT30 may contribute to primary production in its habitat. This ability to harness light energy can play a significant role in nutrient cycling and ecosystem dynamics, particularly in oligotrophic waters where nutrient availability is limited. In summary, Erythrobacter sp. YT30 exhibits key traits such as being Gram-negative and rod-shaped, with a single replicon and specific genomic data available for research. Its ecological role as a potential phototroph highlights the importance of this bacterium in nutrient cycling and its contribution to the productivity of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter sp. YT30
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic environments; South China Sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erythrobacter sp. YT30 contig00004, whole genome shotgun sequence.

Gene Summary

Adenine Count

689371 bp

Thymine Count

691989 bp

Guanine Count

913533 bp

Cytosine Count

907798 bp

Genome Length

3202691 bp

Protein-coding Genes

2997 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ump kinaseAUC45_00330Not AvailablePositive65948 - 6667025734.2
ribosome recycling factorAUC45_00335Not AvailablePositive66677 - 6723420398.5
udp pyrophosphate synthaseAUC45_00340Not AvailablePositive67260 - 6798826835.1
phosphatidate cytidylyltransferaseAUC45_00345Not AvailablePositive67981 - 6866423724.4
1-deoxy-d-xylulose 5-phosphate reductoisomeraseAUC45_00350Not AvailablePositive68676 - 6983940152.1
rip metalloprotease rsepAUC45_00355Not AvailablePositive69848 - 7098140421.9
outer membrane protein assembly factor bamaAUC45_00360Not AvailablePositive71172 - 73883100520.0
hypothetical proteinAUC45_00365Not AvailablePositive73883 - 7457524745.2
beta-hydroxyacyl-acp dehydrataseAUC45_00370Not AvailablePositive74606 - 7509117653.6
50s ribosomal protein l31AUC45_00375Not AvailablePositive75186 - 754108137.54

Displaying genes 61 – 70 of 2997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.