Clavibacter phaseoli str. CFBP 8627

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter phaseoli str. CFBP 8627 is a rod-shaped bacterium notable for its single replicon and presence of flagella. The flagella contribute to its motility, allowing the organism to navigate its environment effectively. The strain is cataloged under the accession number QWGV00000000.1, indicating its availability for further research and study. As a member of the genus Clavibacter, C. phaseoli is typically associated with plant pathogens, particularly affecting leguminous crops. This association underscores the ecological significance of the bacterium, as it may play a role in plant health and disease dynamics. Understanding the traits of C. phaseoli str. CFBP 8627, including its morphology and genetic characteristics, can provide insights into its pathogenic mechanisms and interactions with host plants. The presence of a single replicon suggests a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. Overall, the study of Clavibacter phaseoli str. CFBP 8627 can enhance our understanding of microbial interactions within agricultural systems, particularly concerning disease management and crop protection.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter phaseoli
StrainCFBP 8627

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter phaseoli strain CFBP 8627 CFBP86271009, whole genome

Gene Summary

Adenine Count

404112 bp

Thymine Count

405886 bp

Guanine Count

1123244 bp

Cytosine Count

1118731 bp

Genome Length

3051974 bp

Protein-coding Genes

3289 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,4-beta-xylanaseDZG03_15220Not AvailablePositive2792530 - 279382547218.0
moxr family atpaseDZG03_15225Not AvailableNegative2793826 - 279470631657.1
16s rrna (guanine(966)-n(2))-methyltransferase rsmdDZG03_15230Not AvailablePositive2794969 - 27951526374.68
aminotransferase class v-fold plp-dependent enzymeDZG03_15235Not AvailableNegative2795153 - 279645546300.0
had family hydrolaseDZG03_15240Not AvailablePositive2796456 - 279774944274.0
abc transporter atp-binding proteinDZG03_15245Not AvailablePositive2797750 - 279864731936.3
atp-binding cassette domain-containing proteinDZG03_15250Not AvailablePositive2798757 - 27990409396.1
fha domain-containing proteinDZG03_15255Not AvailableNegative2799041 - 27991212832.19
nad-dependent epimerase/dehydratase family proteinDZG03_15260Not AvailableNegative2799072 - 280005835264.8
hypothetical proteinDZG03_15265Not AvailablePositive2800329 - 280161340856.6

Displaying genes 2911 – 2920 of 3340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.