Clavibacter phaseoli str. CFBP 8627

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter phaseoli str. CFBP 8627 is a rod-shaped bacterium notable for its single replicon and presence of flagella. The flagella contribute to its motility, allowing the organism to navigate its environment effectively. The strain is cataloged under the accession number QWGV00000000.1, indicating its availability for further research and study. As a member of the genus Clavibacter, C. phaseoli is typically associated with plant pathogens, particularly affecting leguminous crops. This association underscores the ecological significance of the bacterium, as it may play a role in plant health and disease dynamics. Understanding the traits of C. phaseoli str. CFBP 8627, including its morphology and genetic characteristics, can provide insights into its pathogenic mechanisms and interactions with host plants. The presence of a single replicon suggests a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. Overall, the study of Clavibacter phaseoli str. CFBP 8627 can enhance our understanding of microbial interactions within agricultural systems, particularly concerning disease management and crop protection.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter phaseoli
StrainCFBP 8627

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter phaseoli strain CFBP 8627 CFBP86271009, whole genome

Gene Summary

Adenine Count

404112 bp

Thymine Count

405886 bp

Guanine Count

1123244 bp

Cytosine Count

1118731 bp

Genome Length

3051974 bp

Protein-coding Genes

3289 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigma-70DZG03_14020Not AvailablePositive2608446 - 26085603812.63
aminopeptidase p family proteinDZG03_14025Not AvailableNegative2608561 - 260910619374.9
alpha/beta fold hydrolaseDZG03_14030Not AvailableNegative2609103 - 261041047355.2
cysteine--trna ligaseDZG03_14035Not AvailablePositive2610596 - 261205052762.6
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbDZG03_14040Not AvailablePositive2612040 - 261237311853.9
glycosyltransferase family 2 proteinDZG03_14045Not AvailableNegative2612374 - 261324730612.9
phosphodiester glycosidase family proteinDZG03_14050Not AvailableNegative2613244 - 261422733376.8
biliverdin-producing heme oxygenaseDZG03_14065Not AvailablePositive2614554 - 261521324625.3
dna/rna non-specific endonucleaseDZG03_14070Not AvailablePositive2615300 - 261612130149.3
glycosyltransferase family 2 proteinDZG03_14075Not AvailableNegative2616152 - 261803062994.3

Displaying genes 2691 – 2700 of 3340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.