Clavibacter phaseoli str. CFBP 8627

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter phaseoli str. CFBP 8627 is a rod-shaped bacterium notable for its single replicon and presence of flagella. The flagella contribute to its motility, allowing the organism to navigate its environment effectively. The strain is cataloged under the accession number QWGV00000000.1, indicating its availability for further research and study. As a member of the genus Clavibacter, C. phaseoli is typically associated with plant pathogens, particularly affecting leguminous crops. This association underscores the ecological significance of the bacterium, as it may play a role in plant health and disease dynamics. Understanding the traits of C. phaseoli str. CFBP 8627, including its morphology and genetic characteristics, can provide insights into its pathogenic mechanisms and interactions with host plants. The presence of a single replicon suggests a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. Overall, the study of Clavibacter phaseoli str. CFBP 8627 can enhance our understanding of microbial interactions within agricultural systems, particularly concerning disease management and crop protection.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter phaseoli
StrainCFBP 8627

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter phaseoli strain CFBP 8627 CFBP86271009, whole genome

Gene Summary

Adenine Count

404112 bp

Thymine Count

405886 bp

Guanine Count

1123244 bp

Cytosine Count

1118731 bp

Genome Length

3051974 bp

Protein-coding Genes

3289 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28DZG03_00940Not AvailableNegative176836 - 1770728643.66
transcriptional repressorDZG03_00945Not AvailableNegative177247 - 17769315522.9
metal abc transporter permeaseDZG03_00950Not AvailableNegative177690 - 17861631235.2
abc transporter atp-binding proteinDZG03_00955Not AvailableNegative178613 - 17947630720.6
abc transporter substrate-binding proteinDZG03_00960Not AvailableNegative179473 - 18042032373.5
2-oxo acid dehydrogenase subunit e2DZG03_00965Not AvailableNegative180490 - 18189049187.0
alpha-ketoacid dehydrogenase subunit betaDZG03_00970Not AvailableNegative181948 - 18291334958.9
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaDZG03_00975Not AvailableNegative183000 - 18411240524.9
pyridoxal phosphate-dependent aminotransferaseDZG03_00980Not AvailableNegative184122 - 18522238888.5
phage holin family proteinDZG03_00985Not AvailablePositive185293 - 18568813830.6

Displaying genes 191 – 200 of 3340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.