Clavibacter phaseoli str. CFBP 8627

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter phaseoli str. CFBP 8627 is a rod-shaped bacterium notable for its single replicon and presence of flagella. The flagella contribute to its motility, allowing the organism to navigate its environment effectively. The strain is cataloged under the accession number QWGV00000000.1, indicating its availability for further research and study. As a member of the genus Clavibacter, C. phaseoli is typically associated with plant pathogens, particularly affecting leguminous crops. This association underscores the ecological significance of the bacterium, as it may play a role in plant health and disease dynamics. Understanding the traits of C. phaseoli str. CFBP 8627, including its morphology and genetic characteristics, can provide insights into its pathogenic mechanisms and interactions with host plants. The presence of a single replicon suggests a streamlined genomic organization that may facilitate efficient replication and adaptation to its ecological niche. Overall, the study of Clavibacter phaseoli str. CFBP 8627 can enhance our understanding of microbial interactions within agricultural systems, particularly concerning disease management and crop protection.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter phaseoli
StrainCFBP 8627

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter phaseoli strain CFBP 8627 CFBP86271009, whole genome

Gene Summary

Adenine Count

404112 bp

Thymine Count

405886 bp

Guanine Count

1123244 bp

Cytosine Count

1118731 bp

Genome Length

3051974 bp

Protein-coding Genes

3289 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDZG03_08790Not AvailableNegative1706881 - 17070967555.44
methylated-dna--[protein]-cysteine s-methyltransferaseDZG03_08795Not AvailableNegative1707154 - 170778022531.9
rna polymerase subunit sigmaDZG03_08800Not AvailableNegative1707777 - 17079736366.56
phosphoenolpyruvate--protein phosphotransferaseDZG03_08805Not AvailableNegative1707974 - 17081435687.75
yihy/virulence factor brkb family proteinDZG03_08810Not AvailablePositive1708269 - 170937838719.2
exodeoxyribonuclease iiiDZG03_08815Not AvailablePositive1709389 - 171023431040.2
tryptophan--trna ligaseDZG03_08820Not AvailablePositive1710311 - 171132436840.9
had family hydrolaseDZG03_08825Not AvailablePositive1711321 - 171208526758.4
riboflavin biosynthesis protein ribdDZG03_08830Not AvailablePositive1712366 - 171266710141.0
nad(p)h-hydrate dehydrataseDZG03_08835Not AvailableNegative1712668 - 17127673629.13

Displaying genes 1711 – 1720 of 3340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.