Pseudomonas sp. TTU2014-080ASC

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TTU2014-080ASC is a bacterial strain characterized by a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number LKKK00000000.1, indicating its sequenced genome is available for further study. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments. This adaptability is often linked to their role in bioremediation, where they can degrade various pollutants. The specific traits of Pseudomonas sp. TTU2014-080ASC may contribute to ecological interactions, particularly in environments impacted by anthropogenic activities. The presence of a single replicon may also imply a potential for efficient replication and genetic stability, which can be advantageous in fluctuating environmental conditions. This aspect may play a significant role in the strain's ecological fitness and its ability to adapt to new niches. Overall, Pseudomonas sp. TTU2014-080ASC exemplifies the adaptive capabilities of Pseudomonas species, potentially making it a valuable organism for studies in environmental microbiology, particularly in contexts involving biodegradation and ecosystem resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TTU2014-080ASC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TTU2014-080ASC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TTU2014-080ASC scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

982355 bp

Thymine Count

976417 bp

Guanine Count

1274402 bp

Cytosine Count

1289531 bp

Genome Length

4522705 bp

Protein-coding Genes

3995 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseAO726_16600Not AvailablePositive3618720 - 362005148733.7
hypothetical proteinAO726_16605Not AvailablePositive3620193 - 362073518438.1
n-acetylmuramoyl-l-alanine amidaseAO726_16610Not AvailablePositive3620732 - 362145125941.3
hypothetical proteinAO726_16615Not AvailablePositive3621451 - 362173811202.6
hypothetical proteinAO726_16625Not AvailablePositive3622523 - 362293315075.4
diguanylate cyclaseAO726_16630Not AvailableNegative3623150 - 362361117633.1
chemotaxis protein checAO726_16635Not AvailableNegative3623615 - 362460736135.1
nad(fad)-utilizing dehydrogenaseAO726_16640Not AvailableNegative3624678 - 362592244621.7
class v aminotransferaseAO726_16645Not AvailablePositive3626048 - 362718140474.8
hypothetical proteinAO726_16650Not AvailableNegative3627354 - 362785417211.2

Displaying genes 3301 – 3310 of 4105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.