Pseudomonas sp. TTU2014-080ASC

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TTU2014-080ASC is a bacterial strain characterized by a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number LKKK00000000.1, indicating its sequenced genome is available for further study. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments. This adaptability is often linked to their role in bioremediation, where they can degrade various pollutants. The specific traits of Pseudomonas sp. TTU2014-080ASC may contribute to ecological interactions, particularly in environments impacted by anthropogenic activities. The presence of a single replicon may also imply a potential for efficient replication and genetic stability, which can be advantageous in fluctuating environmental conditions. This aspect may play a significant role in the strain's ecological fitness and its ability to adapt to new niches. Overall, Pseudomonas sp. TTU2014-080ASC exemplifies the adaptive capabilities of Pseudomonas species, potentially making it a valuable organism for studies in environmental microbiology, particularly in contexts involving biodegradation and ecosystem resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TTU2014-080ASC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TTU2014-080ASC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TTU2014-080ASC scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

982355 bp

Thymine Count

976417 bp

Guanine Count

1274402 bp

Cytosine Count

1289531 bp

Genome Length

4522705 bp

Protein-coding Genes

3995 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutaredoxinAO726_15935Not AvailableNegative3465910 - 34661649429.42
sulfurtransferaseAO726_15940Not AvailableNegative3466166 - 346657914870.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseAO726_15945Not AvailablePositive3466724 - 346825954991.1
peptidase m23AO726_15950Not AvailablePositive3468420 - 346966446121.8
peptidase s41AO726_15955Not AvailablePositive3469704 - 347100246207.1
imidazole glycerol phosphate synthase subunit hisfAO726_15960Not AvailableNegative3471129 - 347189927079.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAO726_15965Not AvailableNegative3471910 - 347264725769.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAO726_15970Not AvailableNegative3472684 - 34729449897.8
imidazole glycerol phosphate synthase subunit hishAO726_15975Not AvailableNegative3472945 - 347358323437.9
imidazoleglycerol-phosphate dehydrataseAO726_15980Not AvailableNegative3473583 - 347417621900.3

Displaying genes 3171 – 3180 of 4105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.