Candidatus Desulfovibrio trichonymphae

Gram-negativeCoccus

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Candidatus Desulfovibrio trichonymphae is a Gram-negative, coccus-shaped bacterium that resides within the protist cell of Trichonympha agilis and other species of Trichonympha. This organism is characterized by the presence of flagella, which facilitate motility within its host environment. Candidatus Desulfovibrio trichonymphae has a unique genetic structure, containing a single replicon, which may influence its replication and genetic stability. Additionally, it possesses two membranes, a characteristic typical of Gram-negative bacteria, providing structural integrity and a barrier to certain environmental factors. The association of Candidatus Desulfovibrio trichonymphae with Trichonympha suggests a potential symbiotic relationship, where the bacterium may contribute to the metabolic processes of its host. Such interactions are significant, as they could play a role in nutrient cycling within the gut ecosystem of termites, where Trichonympha is commonly found. This relationship highlights the importance of microbial diversity in ecological systems, particularly in the context of host-associated microbiomes. Understanding the specific roles of bacteria like Candidatus Desulfovibrio trichonymphae can provide insights into the complex interactions that sustain the health and functionality of their protist hosts and the broader ecosystems they inhabit. The accession number NZ_AP017368.1 can be referenced for further genomic information on this organism.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesCandidatus Desulfovibrio trichonymphae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranes2
Image of Candidatus Desulfovibrio trichonymphae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatprotist cell
Biotic relationshipNot Available
Host(s)Trichonympha agilis, Trichonympha
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Desulfovibrio trichonymphae


Gene Summary

Adenine Count

320101 bp

Thymine Count

316987 bp

Guanine Count

385101 bp

Cytosine Count

387867 bp

Genome Length

1410056 bp

Protein-coding Genes

1338 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dnaa atpase domain-containing proteinRSDT_RS00005Not AvailablePositive1 - 141351905.8
prephenate dehydrogenase/arogenate dehydrogenase family proteinRSDT_RS00010Not AvailableNegative1423 - 220228661.7
3-phosphoshikimate 1-carboxyvinyltransferaseRSDT_RS00015Not AvailableNegative2199 - 359049602.6
prephenate dehydrataseRSDT_RS00020Not AvailableNegative3587 - 480743909.2
3-dehydroquinate synthase ii family proteinRSDT_RS00025Not AvailableNegative4812 - 579535114.3
2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthaseRSDT_RS00030Not AvailableNegative5797 - 659428043.2
signal recognition particle proteinRSDT_RS00035Not AvailableNegative7279 - 874853002.4
ntp transferase domain-containing proteinRSDT_RS00040Not AvailableNegative8974 - 962123136.2
selenium cofactor biosynthesis protein yqecRSDT_RS00045Not AvailableNegative9588 - 1037627536.4
Trna-metNot AvailableNot AvailablePositive11024 - 11099Not Available

Displaying genes 1 – 10 of 1397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.