Candidatus Desulfovibrio trichonymphae

Gram-negativeCoccus

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Candidatus Desulfovibrio trichonymphae is a Gram-negative, coccus-shaped bacterium that resides within the protist cell of Trichonympha agilis and other species of Trichonympha. This organism is characterized by the presence of flagella, which facilitate motility within its host environment. Candidatus Desulfovibrio trichonymphae has a unique genetic structure, containing a single replicon, which may influence its replication and genetic stability. Additionally, it possesses two membranes, a characteristic typical of Gram-negative bacteria, providing structural integrity and a barrier to certain environmental factors. The association of Candidatus Desulfovibrio trichonymphae with Trichonympha suggests a potential symbiotic relationship, where the bacterium may contribute to the metabolic processes of its host. Such interactions are significant, as they could play a role in nutrient cycling within the gut ecosystem of termites, where Trichonympha is commonly found. This relationship highlights the importance of microbial diversity in ecological systems, particularly in the context of host-associated microbiomes. Understanding the specific roles of bacteria like Candidatus Desulfovibrio trichonymphae can provide insights into the complex interactions that sustain the health and functionality of their protist hosts and the broader ecosystems they inhabit. The accession number NZ_AP017368.1 can be referenced for further genomic information on this organism.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesCandidatus Desulfovibrio trichonymphae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranes2
Image of Candidatus Desulfovibrio trichonymphae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatprotist cell
Biotic relationshipNot Available
Host(s)Trichonympha agilis, Trichonympha
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Desulfovibrio trichonymphae strain Rs-N31 chromosome,

Gene Summary

Adenine Count

320101 bp

Thymine Count

316987 bp

Guanine Count

385101 bp

Cytosine Count

387867 bp

Genome Length

1410056 bp

Protein-coding Genes

1338 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyse family transporterRSDT_RS07745Not AvailableNegative874877 - 87521511096.8
giy-yig nuclease family proteinRSDT_RS04265Not AvailableNegative875209 - 87549610141.3
single-stranded-dna-specific exonuclease recjRSDT_RS04270Not AvailableNegative875539 - 87725761770.0
orotidine-5'-phosphate decarboxylaseRSDT_RS04280Not AvailableNegative877531 - 87821423767.3
guanylate kinaseRSDT_RS04285Not AvailableNegative878239 - 87884722803.2
duf370 domain-containing proteinRSDT_RS04290Not AvailableNegative878837 - 87916912110.2
yicc/yloc family endoribonucleaseRSDT_RS04295Not AvailableNegative879253 - 88013133137.5
fmdb family zinc ribbon proteinRSDT_RS04300Not AvailableNegative880295 - 8805558704.73
nad+ synthaseRSDT_RS04305Not AvailableNegative880640 - 88228059314.9
5s ribosomal rnaNot AvailableNot AvailablePositive882464 - 882577Not Available

Displaying genes 871 – 880 of 1397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.