Candidatus Desulfovibrio trichonymphae

Gram-negativeCoccus

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Candidatus Desulfovibrio trichonymphae is a Gram-negative, coccus-shaped bacterium that resides within the protist cell of Trichonympha agilis and other species of Trichonympha. This organism is characterized by the presence of flagella, which facilitate motility within its host environment. Candidatus Desulfovibrio trichonymphae has a unique genetic structure, containing a single replicon, which may influence its replication and genetic stability. Additionally, it possesses two membranes, a characteristic typical of Gram-negative bacteria, providing structural integrity and a barrier to certain environmental factors. The association of Candidatus Desulfovibrio trichonymphae with Trichonympha suggests a potential symbiotic relationship, where the bacterium may contribute to the metabolic processes of its host. Such interactions are significant, as they could play a role in nutrient cycling within the gut ecosystem of termites, where Trichonympha is commonly found. This relationship highlights the importance of microbial diversity in ecological systems, particularly in the context of host-associated microbiomes. Understanding the specific roles of bacteria like Candidatus Desulfovibrio trichonymphae can provide insights into the complex interactions that sustain the health and functionality of their protist hosts and the broader ecosystems they inhabit. The accession number NZ_AP017368.1 can be referenced for further genomic information on this organism.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesCandidatus Desulfovibrio trichonymphae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranes2
Image of Candidatus Desulfovibrio trichonymphae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatprotist cell
Biotic relationshipNot Available
Host(s)Trichonympha agilis, Trichonympha
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Desulfovibrio trichonymphae strain Rs-N31 chromosome,

Gene Summary

Adenine Count

320101 bp

Thymine Count

316987 bp

Guanine Count

385101 bp

Cytosine Count

387867 bp

Genome Length

1410056 bp

Protein-coding Genes

1338 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
act domain-containing proteinRSDT_RS07390Not AvailablePositive709266 - 7094105462.69
aspartate ammonia-lyaseRSDT_RS03450Not AvailablePositive709725 - 71113750988.6
anaerobic c4-dicarboxylate transporterRSDT_RS03455Not AvailablePositive711137 - 71244145665.9
primosomal protein n'RSDT_RS03460Not AvailableNegative712479 - 71482786388.5
ornithine carbamoyltransferaseRSDT_RS03465Not AvailablePositive714913 - 71593238247.6
aspartate carbamoyltransferase catalytic subunitRSDT_RS03475Not AvailablePositive716229 - 71718534719.0
dihydroorotaseRSDT_RS03480Not AvailablePositive717230 - 71849244904.8
pyridoxal phosphate-dependent aminotransferaseRSDT_RS03485Not AvailableNegative718538 - 71972242663.6
homoserine dehydrogenaseRSDT_RS03490Not AvailableNegative719750 - 72106947018.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeRSDT_RS03495Not AvailableNegative721122 - 72229744044.2

Displaying genes 701 – 710 of 1397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.