Pseudoalteromonas sp. P1-26

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. P1-26 is a rod-shaped bacterium characterized by a single replicon. The organism is part of the Pseudoalteromonas genus, which is known for its diverse metabolic capabilities and ecological significance, particularly within marine environments. The specific accession number for this strain is LKDX00000000.1, which can be used for further genomic studies and data retrieval. The rod shape of Pseudoalteromonas sp. P1-26 may contribute to its adaptability and survivability in various ecological niches, including the oceanic microbiome. Members of the Pseudoalteromonas genus are often noted for their role in biogeochemical cycles and interactions within microbial communities. They are typically involved in the degradation of organic matter, which is crucial for nutrient cycling in marine ecosystems. Understanding the traits of Pseudoalteromonas sp. P1-26 can provide insights into its ecological roles, particularly in relation to nutrient availability and microbial interactions in its environment. The single replicon indicates a streamlined genomic organization, which may influence its adaptability and responses to environmental changes. Overall, studying Pseudoalteromonas sp. P1-26 can enhance our understanding of microbial dynamics in marine ecosystems and their contributions to ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. P1-26
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. P1-26 AN394_contig000219, whole genome

Gene Summary

Adenine Count

1387603 bp

Thymine Count

1383288 bp

Guanine Count

971538 bp

Cytosine Count

973384 bp

Genome Length

4715813 bp

Protein-coding Genes

4183 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
farnesyl diphosphate synthaseAN394_03234P22939Positive3562654 - 356354131978.1
1-deoxy-d-xylulose-5-phosphate synthaseAN394_03235Q3II09Positive3563631 - 356549367439.0
diguanylate cyclase doscAN394_03236Not AvailableNegative3565554 - 3568610114617.0
phosphatidylglycerophosphatase aAN394_03237P18200Negative3568674 - 356915917714.1
thiamine-monophosphate kinaseAN394_03238P55881Negative3569156 - 357013035131.8
n utilization substance protein bAN394_03239Q3II29Negative3570175 - 357058515410.8
6,7-dimethyl-8-ribityllumazine synthaseAN394_03240Q3II28Negative3570601 - 357106516135.6
riboflavin biosynthesis protein ribbaAN394_03241P51962Negative3571171 - 357228640432.3
riboflavin synthaseAN394_03242P51961Negative3572329 - 357298223597.2
riboflavin biosynthesis protein ribdAN394_03243P44326Negative3572987 - 357412640915.3

Displaying genes 3241 – 3250 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

220 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 220 metabolites

Health Effects

No health effects information available for this bacterium.