Nocardiopsis sp. TSRI0078

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Nocardiopsis

Description

Nocardiopsis sp. TSRI0078 is a Gram-positive bacterium characterized by its rod-shaped morphology and the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating a straightforward genomic organization typical of many bacterial strains. The accession number for Nocardiopsis sp. TSRI0078 is LWLB00000000.1, which provides a unique identifier for genomic data associated with this organism. The characteristics of Nocardiopsis species, including their Gram-positive nature and rod shape, suggest that they are likely involved in various ecological roles, particularly in soil environments where they can participate in the degradation of organic materials. Understanding the traits of Nocardiopsis sp. TSRI0078 contributes to insights into its potential applications in biotechnology, particularly in bioremediation and the production of bioactive compounds. The presence of flagella may enhance its ability to navigate through complex environments, potentially aiding in its ecological functions. Overall, the specific traits of Nocardiopsis sp. TSRI0078 suggest its significance in microbial ecology and its potential utility in environmental and industrial applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusNocardiopsis
SpeciesNocardiopsis sp. TSRI0078
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nocardiopsis sp. TSRI0078
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardiopsis sp. TSRI0078 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

860608 bp

Thymine Count

857659 bp

Guanine Count

2192724 bp

Cytosine Count

2196921 bp

Genome Length

6108783 bp

Protein-coding Genes

5021 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine synthaseA6A08_00300Not AvailablePositive69578 - 7114356561.2
fad-dependent oxidoreductaseA6A08_00305Not AvailableNegative71549 - 7297351622.8
abc transporter permeaseA6A08_00310Not AvailableNegative73017 - 7388631334.5
abc transporter permeaseA6A08_00315Not AvailableNegative73883 - 7473731142.6
abc transporter substrate-binding proteinA6A08_00320Not AvailableNegative74748 - 7594144038.1
spermidine/putrescine abc transporter atp-binding proteinA6A08_00325Not AvailableNegative76196 - 7735041241.2
gamma-aminobutyraldehyde dehydrogenaseA6A08_00330Not AvailableNegative77449 - 7889751831.7
hypothetical proteinA6A08_00335Not AvailablePositive79183 - 8050248143.2
hypothetical proteinA6A08_00340Not AvailableNegative80576 - 8102514641.2
flavodoxinA6A08_00345Not AvailableNegative81110 - 8156816082.0

Displaying genes 61 – 70 of 5088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.