Nocardiopsis sp. TSRI0078

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Nocardiopsis

Description

Nocardiopsis sp. TSRI0078 is a Gram-positive bacterium characterized by its rod-shaped morphology and the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating a straightforward genomic organization typical of many bacterial strains. The accession number for Nocardiopsis sp. TSRI0078 is LWLB00000000.1, which provides a unique identifier for genomic data associated with this organism. The characteristics of Nocardiopsis species, including their Gram-positive nature and rod shape, suggest that they are likely involved in various ecological roles, particularly in soil environments where they can participate in the degradation of organic materials. Understanding the traits of Nocardiopsis sp. TSRI0078 contributes to insights into its potential applications in biotechnology, particularly in bioremediation and the production of bioactive compounds. The presence of flagella may enhance its ability to navigate through complex environments, potentially aiding in its ecological functions. Overall, the specific traits of Nocardiopsis sp. TSRI0078 suggest its significance in microbial ecology and its potential utility in environmental and industrial applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusNocardiopsis
SpeciesNocardiopsis sp. TSRI0078
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nocardiopsis sp. TSRI0078
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardiopsis sp. TSRI0078 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

860608 bp

Thymine Count

857659 bp

Guanine Count

2192724 bp

Cytosine Count

2196921 bp

Genome Length

6108783 bp

Protein-coding Genes

5021 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporterA6A08_21035Not AvailableNegative1492915 - 149480167529.9
siroheme synthaseA6A08_21040Not AvailableNegative1494874 - 149615443899.4
5,6-dimethylbenzimidazole synthaseA6A08_21045Not AvailableNegative1496360 - 149876282811.2
n-acetylmuramoyl-l-alanine amidaseA6A08_21050Not AvailablePositive1499334 - 150043438099.6
ribosomal-protein-serine acetyltransferaseA6A08_21055Not AvailablePositive1500631 - 150120620882.8
nucleotidyltransferaseA6A08_21060Not AvailableNegative1501500 - 150179011252.3
serine/threonine protein kinaseA6A08_21065Not AvailablePositive1502225 - 150442677522.1
nadph:quinone reductaseA6A08_21070Not AvailablePositive1504507 - 150547233341.9
hypothetical proteinA6A08_21075Not AvailableNegative1505537 - 150661639129.2
hypothetical proteinA6A08_21080Not AvailableNegative1506654 - 150709415125.8

Displaying genes 1291 – 1300 of 5088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.