Labilibaculum antarcticum str. SPP2

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Labilibaculum

Description

Labilibaculum antarcticum strain SPP2 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain is cataloged under the accession number NZ_AP018042.1, which provides a reference point for genomic and phylogenetic studies. This bacterium is of particular interest due to its adaptation to Antarctic environments, where extreme conditions can pose significant challenges for microbial life. The ecological role of Labilibaculum antarcticum in such habitats may include nutrient cycling and interactions with other microbial communities, contributing to the overall ecosystem dynamics in polar regions. Understanding the genomic traits and environmental adaptations of Labilibaculum antarcticum can shed light on microbial resilience and survival strategies in harsh climates. The study of its genome may also provide insights into potential biotechnological applications, such as the development of cold-active enzymes that could be utilized in various industrial processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusLabilibaculum
SpeciesLabilibaculum antarcticum
StrainSPP2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibaculum antarcticum strain SPP2 chromosome, complete genome.

Gene Summary

Adenine Count

1822666 bp

Thymine Count

1837777 bp

Guanine Count

1025628 bp

Cytosine Count

1032920 bp

Genome Length

5718991 bp

Protein-coding Genes

4402 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6320 domain-containing proteinALGA_RS15425Not AvailablePositive3928087 - 392882127593.5
type ii caax prenyl endopeptidase rce1 family proteinALGA_RS15430Not AvailableNegative3928818 - 392948326050.0
slipin family proteinALGA_RS15435Not AvailableNegative3929620 - 393036328118.8
radical sam proteinALGA_RS15440Not AvailablePositive3930719 - 393166035500.5
imp dehydrogenaseALGA_RS15445Not AvailablePositive3931864 - 393336054823.3
ykgj family cysteine cluster proteinALGA_RS15450Not AvailablePositive3933587 - 393444732412.9
crp/fnr family transcriptional regulatorALGA_RS15455Not AvailablePositive3934999 - 393558022277.0
hypothetical proteinALGA_RS15460Not AvailablePositive3935661 - 393628123232.8
alcohol dehydrogenase-like regulatory protein ercaALGA_RS15465Not AvailablePositive3936542 - 393771743116.2
atp-binding proteinALGA_RS15470Not AvailablePositive3937719 - 393891545486.7

Displaying genes 3071 – 3080 of 4510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.