Labilibaculum antarcticum str. SPP2

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Labilibaculum

Description

Labilibaculum antarcticum strain SPP2 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain is cataloged under the accession number NZ_AP018042.1, which provides a reference point for genomic and phylogenetic studies. This bacterium is of particular interest due to its adaptation to Antarctic environments, where extreme conditions can pose significant challenges for microbial life. The ecological role of Labilibaculum antarcticum in such habitats may include nutrient cycling and interactions with other microbial communities, contributing to the overall ecosystem dynamics in polar regions. Understanding the genomic traits and environmental adaptations of Labilibaculum antarcticum can shed light on microbial resilience and survival strategies in harsh climates. The study of its genome may also provide insights into potential biotechnological applications, such as the development of cold-active enzymes that could be utilized in various industrial processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusLabilibaculum
SpeciesLabilibaculum antarcticum
StrainSPP2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibaculum antarcticum strain SPP2 chromosome, complete genome.

Gene Summary

Adenine Count

1822666 bp

Thymine Count

1837777 bp

Guanine Count

1025628 bp

Cytosine Count

1032920 bp

Genome Length

5718991 bp

Protein-coding Genes

4402 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter large permeaseALGA_RS12685Not AvailableNegative3211336 - 321279651168.2
trap transporter small permeaseALGA_RS12690Not AvailableNegative3212796 - 321326917575.1
trap transporter substrate-binding proteinALGA_RS12695Not AvailableNegative3213273 - 321426837429.3
mannonate dehydrataseALGA_RS12700Not AvailableNegative3214329 - 321551344239.1
sdr family oxidoreductaseALGA_RS12705Not AvailableNegative3215642 - 321648129789.9
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseALGA_RS12710Not AvailableNegative3216488 - 321715924409.8
sugar kinaseALGA_RS12715Not AvailableNegative3217273 - 321831037573.5
glucuronate isomeraseALGA_RS12720Not AvailableNegative3218334 - 321973454029.9
hipa domain-containing proteinALGA_RS12725Not AvailablePositive3220229 - 322075020231.6
amidohydrolaseALGA_RS12730Not AvailablePositive3221079 - 322236246795.9

Displaying genes 2521 – 2530 of 4510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.