Labilibaculum antarcticum str. SPP2

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Labilibaculum

Description

Labilibaculum antarcticum strain SPP2 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain is cataloged under the accession number NZ_AP018042.1, which provides a reference point for genomic and phylogenetic studies. This bacterium is of particular interest due to its adaptation to Antarctic environments, where extreme conditions can pose significant challenges for microbial life. The ecological role of Labilibaculum antarcticum in such habitats may include nutrient cycling and interactions with other microbial communities, contributing to the overall ecosystem dynamics in polar regions. Understanding the genomic traits and environmental adaptations of Labilibaculum antarcticum can shed light on microbial resilience and survival strategies in harsh climates. The study of its genome may also provide insights into potential biotechnological applications, such as the development of cold-active enzymes that could be utilized in various industrial processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusLabilibaculum
SpeciesLabilibaculum antarcticum
StrainSPP2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibaculum antarcticum strain SPP2 chromosome, complete genome.

Gene Summary

Adenine Count

1822666 bp

Thymine Count

1837777 bp

Guanine Count

1025628 bp

Cytosine Count

1032920 bp

Genome Length

5718991 bp

Protein-coding Genes

4402 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine cleavage system protein gcvhALGA_RS10355Not AvailablePositive2627051 - 262742513970.2
translation initiation factor if-2ALGA_RS10360Not AvailableNegative2627555 - 2630614112443.0
transcription termination factor nusaALGA_RS10365Not AvailableNegative2630676 - 263191147121.1
ribosome assembly cofactor rimpALGA_RS10370Not AvailableNegative2631931 - 263239517369.8
hd domain-containing proteinALGA_RS10375Not AvailablePositive2632751 - 263401948359.4
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseALGA_RS10380Not AvailablePositive2634233 - 263527337486.1
bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydrataseALGA_RS10385Not AvailablePositive2635326 - 263671751753.9
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseALGA_RS10390Not AvailablePositive2636790 - 263757228500.7
thiamine-phosphate kinaseALGA_RS10395Not AvailableNegative2637783 - 263883538911.3
s8 family peptidaseALGA_RS10400Not AvailablePositive2639136 - 264033241636.6

Displaying genes 2061 – 2070 of 4510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.