Labilibaculum antarcticum str. SPP2

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Labilibaculum

Description

Labilibaculum antarcticum strain SPP2 is characterized by a single replicon, indicating a streamlined genomic structure typical of certain bacterial species. The strain is cataloged under the accession number NZ_AP018042.1, which provides a reference point for genomic and phylogenetic studies. This bacterium is of particular interest due to its adaptation to Antarctic environments, where extreme conditions can pose significant challenges for microbial life. The ecological role of Labilibaculum antarcticum in such habitats may include nutrient cycling and interactions with other microbial communities, contributing to the overall ecosystem dynamics in polar regions. Understanding the genomic traits and environmental adaptations of Labilibaculum antarcticum can shed light on microbial resilience and survival strategies in harsh climates. The study of its genome may also provide insights into potential biotechnological applications, such as the development of cold-active enzymes that could be utilized in various industrial processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusLabilibaculum
SpeciesLabilibaculum antarcticum
StrainSPP2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labilibaculum antarcticum strain SPP2 chromosome, complete genome.

Gene Summary

Adenine Count

1822666 bp

Thymine Count

1837777 bp

Guanine Count

1025628 bp

Cytosine Count

1032920 bp

Genome Length

5718991 bp

Protein-coding Genes

4402 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 2 isopentenyl-diphosphate delta-isomeraseALGA_RS10155Not AvailablePositive2579313 - 258030837231.9
hydroxymethylglutaryl-coa reductase, degradativeALGA_RS10160Not AvailablePositive2580433 - 258176449488.3
gydia family ghmp kinaseALGA_RS10165Not AvailablePositive2581768 - 258269435444.6
diphosphomevalonate decarboxylaseALGA_RS10170Not AvailablePositive2582713 - 258376538958.4
mevalonate kinaseALGA_RS10175Not AvailablePositive2583772 - 258473436183.4
tetratricopeptide repeat proteinALGA_RS10180Not AvailableNegative2584774 - 258669073557.7
tetratricopeptide repeat proteinALGA_RS10185Not AvailableNegative2586823 - 258880275996.7
ompp1/fadl family transporterALGA_RS10190Not AvailableNegative2588983 - 259024845468.6
fic family proteinALGA_RS10195Not AvailablePositive2590482 - 259162444333.5
succinate--coa ligase subunit alphaALGA_RS10200Not AvailableNegative2591815 - 259269330039.9

Displaying genes 2021 – 2030 of 4510 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.