Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio indicus |
| Strain | J2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723863 bp
Thymine Count
724398 bp
Guanine Count
1261771 bp
Cytosine Count
1256541 bp
Genome Length
3966573 bp
Protein-coding Genes
3594 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efr1 family ferrodoxin | AWY79_RS10070 | Not Available | Positive | 2278999 - 2279796 | 28176.8 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | AWY79_RS10075 | Not Available | Positive | 2279853 - 2280428 | 21571.9 |
| hypothetical protein | AWY79_RS10080 | Not Available | Negative | 2280481 - 2281419 | 36228.1 |
| 4fe-4s domain-containing protein | AWY79_RS10085 | Not Available | Negative | 2281638 - 2281856 | 8177.68 |
| duf933 domain-containing protein | AWY79_RS10090 | P37518 | Negative | 2282041 - 2283054 | 36978.3 |
| shikimate kinase arol | AWY79_RS10095 | Q72DN7 | Positive | 2283196 - 2283711 | 18294.9 |
| trkh family potassium uptake protein | AWY79_RS10100 | O32081 | Positive | 2283758 - 2285116 | 49187.4 |
| trka family potassium uptake protein | AWY79_RS10105 | P39760 | Positive | 2285134 - 2285793 | 24314.5 |
| chorismate synthase | AWY79_RS10110 | C6C0I6 | Positive | 2285803 - 2286867 | 37654.6 |
| duf2238 domain-containing protein | AWY79_RS10115 | P39270 | Negative | 2287053 - 2287577 | 19796.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
