Pseudomonas sp. HMSC059F05

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMSC059F05 is a Gram-negative, rod-shaped bacterium that thrives in multiple habitats as a free-living heterotroph. It requires oxygen for growth, classifying it as an aerobic organism. The bacterium exhibits mobility, facilitated by the presence of flagella, which enables it to navigate through its environment. This species is mesophilic, with an optimal growth temperature of 25°C, indicating that it thrives within a moderate temperature range. Pseudomonas sp. HMSC059F05 possesses a single replicon and is characterized by having two membranes surrounding its cell structure. The adaptability of Pseudomonas sp. HMSC059F05 to various habitats and its heterotrophic lifestyle suggest that it plays a significant role in nutrient cycling within its ecosystems. By breaking down organic matter, this bacterium may contribute to soil health and the overall functioning of microbial communities. Its ability to move and interact with different environments further underscores its ecological significance, as it can respond to changes in nutrient availability and compete with other microorganisms for resources. The accession number LTQU00000000.1 serves as a reference for further genomic studies related to this organism.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas sp. HMSC059F05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas aeruginosa strain HMSC059F05

Gene Summary

Adenine Count

1045745 bp

Thymine Count

1047848 bp

Guanine Count

2084544 bp

Cytosine Count

2085773 bp

Genome Length

6263910 bp

Protein-coding Genes

5573 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1HMPREF2687_12775Not AvailablePositive283572 - 2837908303.06
atp-dependent clp protease atp-binding subunit clpaHMPREF2687_12780Not AvailableNegative283872 - 28614884015.6
atp-dependent clp protease adaptor clpsHMPREF2687_12785Not AvailableNegative286176 - 28654413937.6
cold-shock proteinHMPREF2687_12790Not AvailablePositive286770 - 2870429600.36
isocitrate dehydrogenase (nadp(+))HMPREF2687_12795Not AvailableNegative287115 - 28837145580.0
isocitrate dehydrogenaseHMPREF2687_12800Not AvailablePositive288730 - 29095581626.6
nudix hydrolaseHMPREF2687_12805Not AvailablePositive291042 - 29151217525.7
trna(5-methylaminomethyl-2-thiouridine)- methyltransferaseHMPREF2687_12810Not AvailablePositive291556 - 29268341888.7
dna repair proteinHMPREF2687_12815Not AvailablePositive292680 - 29330023064.1
hypothetical proteinHMPREF2687_12820Not AvailablePositive293303 - 29419331834.8

Displaying genes 321 – 330 of 5708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.