Pseudomonas sp. HMSC059F05

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMSC059F05 is a Gram-negative, rod-shaped bacterium that thrives in multiple habitats as a free-living heterotroph. It requires oxygen for growth, classifying it as an aerobic organism. The bacterium exhibits mobility, facilitated by the presence of flagella, which enables it to navigate through its environment. This species is mesophilic, with an optimal growth temperature of 25°C, indicating that it thrives within a moderate temperature range. Pseudomonas sp. HMSC059F05 possesses a single replicon and is characterized by having two membranes surrounding its cell structure. The adaptability of Pseudomonas sp. HMSC059F05 to various habitats and its heterotrophic lifestyle suggest that it plays a significant role in nutrient cycling within its ecosystems. By breaking down organic matter, this bacterium may contribute to soil health and the overall functioning of microbial communities. Its ability to move and interact with different environments further underscores its ecological significance, as it can respond to changes in nutrient availability and compete with other microorganisms for resources. The accession number LTQU00000000.1 serves as a reference for further genomic studies related to this organism.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas sp. HMSC059F05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas aeruginosa strain HMSC059F05

Gene Summary

Adenine Count

1045745 bp

Thymine Count

1047848 bp

Guanine Count

2084544 bp

Cytosine Count

2085773 bp

Genome Length

6263910 bp

Protein-coding Genes

5573 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding proteinHMPREF2687_24215Not AvailableNegative3318522 - 331927727992.8
amino acid abc transporter substrate-binding proteinHMPREF2687_24220Not AvailableNegative3319427 - 332017927916.6
amino acid abc transporter substrate-binding proteinHMPREF2687_24225Not AvailableNegative3320270 - 332101627567.0
imidazole glycerol phosphate synthase cyclase subunitHMPREF2687_24230Not AvailableNegative3321188 - 332195827132.4
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseHMPREF2687_24235Not AvailableNegative3321969 - 332270625939.3
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseHMPREF2687_24240Not AvailableNegative3322755 - 332301510046.8
imidazole glycerol phosphate synthase subunit hishHMPREF2687_24245Not AvailableNegative3323019 - 332365723568.0
imidazoleglycerol-phosphate dehydrataseHMPREF2687_24250Not AvailableNegative3323657 - 332425021938.4
acetyltransferaseHMPREF2687_24255Not AvailablePositive3324411 - 332480914016.0
pathogenicity locusHMPREF2687_24260Not AvailablePositive3324846 - 33250828090.75

Displaying genes 3041 – 3050 of 5708 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.