Microbispora catharanthi

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Microbispora

Description

Microbispora catharanthi is a species of actinomycete characterized by a single replicon. This trait is notable as it reflects a simpler genomic organization compared to other more complex bacterial species that may possess multiple replicons. The genomic data for Microbispora catharanthi is cataloged under the accession number VDMA00000000.2, which serves as a reference for research and characterization within microbial databases. The significance of Microbispora catharanthi lies in its ecological role, particularly in relation to its potential interactions with plant species, such as Catharanthus roseus (commonly known as vinca or periwinkle). As a member of the actinomycetes, this microorganism may contribute to soil health and nutrient cycling, as many actinomycetes are known for their ability to decompose organic materials and participate in the synthesis of bioactive compounds. Furthermore, the presence of Microbispora species in soil ecosystems suggests they may play a role in the biocontrol of plant pathogens or contribute to the production of secondary metabolites that can have agricultural significance. Understanding the traits and behaviors of Microbispora catharanthi can provide insights into its potential applications in biotechnological and agricultural contexts, particularly given the increasing interest in sustainable practices that leverage microbial interactions in soil and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusMicrobispora
SpeciesMicrobispora catharanthi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbispora catharanthi strain CR1-09

Gene Summary

Adenine Count

1329829 bp

Thymine Count

1333180 bp

Guanine Count

3298967 bp

Cytosine Count

3289638 bp

Genome Length

9251614 bp

Protein-coding Genes

8133 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid permeaseFH610_013220Not AvailablePositive2896343 - 289838573668.8
tram domain-containing proteinFH610_013225Not AvailablePositive2898406 - 289965044779.2
tetr family transcriptional regulatorFH610_013230Not AvailableNegative2899664 - 290021219492.4
zinc-binding dehydrogenaseFH610_013235Not AvailablePositive2900350 - 290131531833.1
hypothetical proteinFH610_013240Not AvailableNegative2901333 - 290250239958.6
tigr03560 family f420-dependent llm class oxidoreductaseFH610_013245Not AvailablePositive2902595 - 290351233289.7
3' terminal rna ribose 2'-o-methyltransferase hen1FH610_013250Not AvailablePositive2903620 - 290514655352.7
polynucleotide kinase-phosphataseFH610_013255Not AvailablePositive2905143 - 290762991108.6
mfs transporterFH610_013260Not AvailableNegative2907736 - 290922351663.7
tetr family transcriptional regulatorFH610_013265Not AvailablePositive2909422 - 291001822327.6

Displaying genes 2541 – 2550 of 8198 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.