Microbispora catharanthi

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Microbispora

Description

Microbispora catharanthi is a species of actinomycete characterized by a single replicon. This trait is notable as it reflects a simpler genomic organization compared to other more complex bacterial species that may possess multiple replicons. The genomic data for Microbispora catharanthi is cataloged under the accession number VDMA00000000.2, which serves as a reference for research and characterization within microbial databases. The significance of Microbispora catharanthi lies in its ecological role, particularly in relation to its potential interactions with plant species, such as Catharanthus roseus (commonly known as vinca or periwinkle). As a member of the actinomycetes, this microorganism may contribute to soil health and nutrient cycling, as many actinomycetes are known for their ability to decompose organic materials and participate in the synthesis of bioactive compounds. Furthermore, the presence of Microbispora species in soil ecosystems suggests they may play a role in the biocontrol of plant pathogens or contribute to the production of secondary metabolites that can have agricultural significance. Understanding the traits and behaviors of Microbispora catharanthi can provide insights into its potential applications in biotechnological and agricultural contexts, particularly given the increasing interest in sustainable practices that leverage microbial interactions in soil and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusMicrobispora
SpeciesMicrobispora catharanthi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbispora catharanthi strain CR1-09

Gene Summary

Adenine Count

1329829 bp

Thymine Count

1333180 bp

Guanine Count

3298967 bp

Cytosine Count

3289638 bp

Genome Length

9251614 bp

Protein-coding Genes

8133 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseFH610_007395Not AvailableNegative1628791 - 162965130626.4
tetr family transcriptional regulatorFH610_007400Not AvailablePositive1629775 - 163038021935.3
yihy/virulence factor brkb family proteinFH610_007405Not AvailableNegative1630391 - 163134133625.8
tryptophan--trna ligaseFH610_007410Not AvailableNegative1631435 - 163244837310.6
duf21 domain-containing proteinFH610_007415Not AvailableNegative1632610 - 163392347138.1
udp-glucose 4-epimerase galeFH610_007420Not AvailablePositive1634087 - 163504033412.6
hypothetical proteinFH610_007425Not AvailableNegative1635096 - 163597431405.7
dha2 family efflux mfs transporter permease subunitFH610_007430Not AvailableNegative1636082 - 163753950608.1
padr family transcriptional regulatorFH610_007435Not AvailablePositive1637566 - 163810219267.1
transporter substrate-binding domain-containing proteinFH610_007440Not AvailableNegative1638131 - 164026373248.1

Displaying genes 1421 – 1430 of 8198 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.