Chryseobacterium sp. ERMR1:04

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. ERMR1:04 is characterized by its rod-shaped morphology. This genus is known for its diverse ecological roles, often found in various environments, including soil and water, where it contributes to the breakdown of organic materials. The strain ERMR1:04 possesses a single replicon, indicating a simpler genomic structure compared to other bacteria that may have multiple replicons. The genomic data for Chryseobacterium sp. ERMR1:04 is accessible under the accession number LIRF00000000.1, which provides a basis for further research into its genetic characteristics and potential applications. This organism's ability to thrive in different ecological niches underscores its adaptability, which may be linked to its metabolic versatility. In summary, Chryseobacterium sp. ERMR1:04, with its rod shape and single replicon, exemplifies the ecological diversity and adaptability of the Chryseobacterium genus. Its presence in various habitats may indicate its importance in environmental microbiology, particularly in nutrient cycling and organic matter degradation.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp. ERMR1:04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium sp. ERMR1:04 contig10, whole genome shotgun

Gene Summary

Adenine Count

1821268 bp

Thymine Count

1826727 bp

Guanine Count

941543 bp

Cytosine Count

943370 bp

Genome Length

5532908 bp

Protein-coding Genes

4524 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine cleavage system protein hAMQ68_17275A0LXS6Negative3914172 - 391454913600.8
gliding motility proteinAMQ68_17280Not AvailableNegative3914660 - 3921730265040.0
atp-dependent dna helicase ruvaAMQ68_17285A0LXS4Negative3921737 - 392232121296.2
hypothetical proteinAMQ68_17290Not AvailableNegative3922497 - 392304821150.8
hypothetical proteinAMQ68_17295Not AvailableNegative3923045 - 392376427796.9
had family hydrolaseAMQ68_17300Q9X0Y1Negative3924206 - 392485024215.1
malic enzymeAMQ68_17305P76558Negative3924872 - 392716084840.7
atpaseAMQ68_17310Not AvailableNegative3927177 - 392802832137.8
hypothetical proteinAMQ68_17315Not AvailableNegative3928113 - 392837610558.2
sugar translocaseAMQ68_17320Not AvailablePositive3928606 - 392906417576.7

Displaying genes 3211 – 3220 of 4609 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

180 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da

Displaying 1–10 of 180 metabolites

Health Effects

No health effects information available for this bacterium.