Burkholderia sp. IDO3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. IDO3 is characterized by having a single replicon, which suggests a streamlined genomic structure. The isolation and genetic sequencing of this species are documented under the accession number NWSG00000000.1. Burkholderia species are known for their diverse metabolic capabilities and ecological versatility, often found in various environments, including soil and water. They can play significant roles in biogeochemical cycles and may interact with other microbial communities. The single replicon in Burkholderia sp. IDO3 may indicate a specific adaptation to its ecological niche, potentially influencing its growth and survival strategies in competitive environments. Understanding the genomic features of Burkholderia sp. IDO3 could provide insights into its ecological roles and interactions with other organisms, especially in nutrient cycling and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. IDO3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. IDO3 Scaffold90, whole genome shotgun sequence.

Gene Summary

Adenine Count

1342231 bp

Thymine Count

1326347 bp

Guanine Count

2601403 bp

Cytosine Count

2682929 bp

Genome Length

7952930 bp

Protein-coding Genes

7079 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)(+) transhydrogenase (re/si-specific) subunit alphaCN645_20105Not AvailablePositive4321522 - 432312055143.1
nad(p)(+) transhydrogenase (re/si-specific) subunit betaCN645_20110Not AvailablePositive4323134 - 432454648881.8
homoprotocatechuate degradation operon regulator hparCN645_20115Not AvailableNegative4324735 - 432513615289.7
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCN645_20120Not AvailablePositive4325310 - 432607726197.6
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCN645_20125Not AvailablePositive4326074 - 432683227729.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseCN645_20130Not AvailablePositive4326849 - 432830652008.1
3,4-dihydroxyphenylacetate 2,3-dioxygenaseCN645_20135Not AvailablePositive4328355 - 432921831950.1
5-carboxymethyl-2-hydroxymuconate isomeraseCN645_20140Not AvailablePositive4329235 - 432963614619.4
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseCN645_20145Not AvailablePositive4329657 - 433046029292.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseCN645_20150Not AvailablePositive4330470 - 433127628339.7

Displaying genes 4001 – 4010 of 7240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.