Burkholderia sp. IDO3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. IDO3 is characterized by having a single replicon, which suggests a streamlined genomic structure. The isolation and genetic sequencing of this species are documented under the accession number NWSG00000000.1. Burkholderia species are known for their diverse metabolic capabilities and ecological versatility, often found in various environments, including soil and water. They can play significant roles in biogeochemical cycles and may interact with other microbial communities. The single replicon in Burkholderia sp. IDO3 may indicate a specific adaptation to its ecological niche, potentially influencing its growth and survival strategies in competitive environments. Understanding the genomic features of Burkholderia sp. IDO3 could provide insights into its ecological roles and interactions with other organisms, especially in nutrient cycling and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. IDO3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. IDO3 Scaffold90, whole genome shotgun sequence.

Gene Summary

Adenine Count

1342231 bp

Thymine Count

1326347 bp

Guanine Count

2601403 bp

Cytosine Count

2682929 bp

Genome Length

7952930 bp

Protein-coding Genes

7079 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive2693663 - 2693749Not Available
squalene synthase hpndCN645_12410Not AvailablePositive2693999 - 269483230656.4
twin-arginine translocation pathway signal sequence domain-containing proteinCN645_12415Not AvailableNegative2694863 - 269607143066.6
hypothetical proteinCN645_12420Not AvailableNegative2696139 - 269764755128.6
hypothetical proteinCN645_12425Not AvailableNegative2697766 - 269804410456.5
two-component system response regulator omprCN645_12435Not AvailablePositive2698311 - 269903627337.1
two-component sensor histidine kinaseCN645_12440Not AvailablePositive2699077 - 270043850608.8
peroxiredoxinCN645_12445Not AvailablePositive2700630 - 270117820308.0
carboxymuconolactone decarboxylase family proteinCN645_12450Not AvailablePositive2701255 - 270178218792.6
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCN645_12455Not AvailableNegative2701876 - 270236116924.4

Displaying genes 2521 – 2530 of 7240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.