Burkholderia sp. IDO3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. IDO3 is characterized by having a single replicon, which suggests a streamlined genomic structure. The isolation and genetic sequencing of this species are documented under the accession number NWSG00000000.1. Burkholderia species are known for their diverse metabolic capabilities and ecological versatility, often found in various environments, including soil and water. They can play significant roles in biogeochemical cycles and may interact with other microbial communities. The single replicon in Burkholderia sp. IDO3 may indicate a specific adaptation to its ecological niche, potentially influencing its growth and survival strategies in competitive environments. Understanding the genomic features of Burkholderia sp. IDO3 could provide insights into its ecological roles and interactions with other organisms, especially in nutrient cycling and plant interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. IDO3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. IDO3 Scaffold90, whole genome shotgun sequence.

Gene Summary

Adenine Count

1342231 bp

Thymine Count

1326347 bp

Guanine Count

2601403 bp

Cytosine Count

2682929 bp

Genome Length

7952930 bp

Protein-coding Genes

7079 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsskCN645_00005Not AvailableNegative132 - 151450962.2
type vi secretion system lipoprotein tssjCN645_00010Not AvailableNegative1511 - 202618683.7
type vi secretion proteinCN645_00015Not AvailablePositive2656 - 304213695.3
type vi secretion system-associated fha domain protein taghCN645_00020Not AvailablePositive3090 - 450851249.2
nad-dependent succinate-semialdehyde dehydrogenaseCN645_00025Not AvailableNegative4839 - 628450778.0
alcohol dehydrogenaseCN645_00030Not AvailableNegative6446 - 778346445.0
aldehyde dehydrogenaseCN645_00035Not AvailableNegative7798 - 1001778338.0
(2fe-2s)-binding proteinCN645_00040Not AvailableNegative10102 - 1055715538.8
antibiotic biosynthesis monooxygenaseCN645_00045Not AvailableNegative10689 - 1098810985.0
tetr family transcriptional regulatorCN645_00055Not AvailableNegative11559 - 1217922538.0

Displaying genes 141 – 150 of 7240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.