Streptomyces sp. CB02058

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. CB02058 is characterized by the presence of flagella, which are crucial for motility, allowing the organism to navigate its environment effectively. This trait is significant as it may contribute to the organism's ability to colonize diverse habitats and interact with other microbial communities. The genomic structure of Streptomyces sp. CB02058 includes a single replicon, indicating a streamlined genetic organization that may be beneficial for its adaptability and efficiency in replicating its genetic material. This single replicon configuration is often associated with organisms that thrive in specific ecological niches, suggesting that CB02058 may have specialized adaptations for survival in its particular environment. The genomic information for Streptomyces sp. CB02058 can be accessed through the accession number LIPG00000000.1. This data provides a foundation for further studies into the organism's genetic makeup and potential metabolic capabilities. In summary, the presence of flagella and the single replicon in Streptomyces sp. CB02058 highlight its potential for environmental adaptability and interaction within microbial ecosystems. Understanding these traits can offer insights into the ecological role of this organism and its contributions to soil health and nutrient cycling, as Streptomyces species are well-known for their roles in the decomposition of organic matter and the production of antibiotics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. CB02058
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. CB02058
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. CB02058 scaffold14, whole genome shotgun

Gene Summary

Adenine Count

1204715 bp

Thymine Count

1183922 bp

Guanine Count

2931346 bp

Cytosine Count

2988145 bp

Genome Length

8308206 bp

Protein-coding Genes

6869 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigmaAMK10_04870Not AvailableNegative1041525 - 104246034869.0
anti-sigma regulatory factorAMK10_04875Not AvailableNegative1042484 - 104289714320.0
hypothetical proteinAMK10_04880Not AvailableNegative1043128 - 10433889514.27
sodium:proton exchangerAMK10_04885Not AvailablePositive1043424 - 104502557248.5
1-aminocyclopropane-1-carboxylate deaminaseAMK10_04890Not AvailableNegative1045001 - 104593632775.2
peptidoglycan-binding proteinAMK10_04895Not AvailableNegative1046020 - 104659821172.0
hemin transporterAMK10_04900Not AvailableNegative1046754 - 104795042492.2
transcriptional regulatorAMK10_04905Not AvailableNegative1048080 - 104853215935.3
fad-linked oxidaseAMK10_04910Not AvailablePositive1048671 - 105005947887.2
hypothetical proteinAMK10_04915Not AvailableNegative1050115 - 105108634852.4

Displaying genes 971 – 980 of 6958 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

27 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002529(3S)-3-hydroxy-L-aspartateC4H6NO5Chemical structure of (3S)-3-hydroxy-L-aspartateNot available
Average148.095Da
Monoisotopic148.0251459Da
BASm00026033-hydroxy-2-methylpropanoyl-CoAC25H38N7O18P3SChemical structure of 3-hydroxy-2-methylpropanoyl-CoANot available
Average849.59Da
Monoisotopic849.1228839Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da

Displaying 1–10 of 27 metabolites

Health Effects

No health effects information available for this bacterium.