Pseudoalteromonas sp. SW0106-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. SW0106-04 is a rod-shaped bacterium characterized by a single replicon. This species belongs to the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The bacterium has been cataloged under the accession number BCAI00000000.1, providing a reference for genetic and genomic studies. The single replicon indicates a streamlined genetic architecture, which may contribute to its adaptability and survival in various habitats. Pseudoalteromonas species are often associated with marine environments and can be found in association with a variety of substrates, including those in deep-sea ecosystems. The rod shape of Pseudoalteromonas sp. SW0106-04 is typical for this genus, which often exhibits such morphology, allowing for efficient movement and nutrient uptake in aquatic settings. The ecological role of Pseudoalteromonas species includes participation in nutrient cycling and potential interactions with other marine microorganisms, which can have implications for biogeochemical processes in their environments. In conclusion, Pseudoalteromonas sp. SW0106-04's rod shape and single replicon structure may enhance its ecological versatility in marine ecosystems, underscoring the importance of such microorganisms in maintaining the health and functioning of oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. SW0106-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. SW0106-04 DNA, contig: CTG030, whole genome

Gene Summary

Adenine Count

1068616 bp

Thymine Count

1065188 bp

Guanine Count

955115 bp

Cytosine Count

963375 bp

Genome Length

4052294 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinW04_3016Not AvailableNegative3276387 - 32765636584.17
rna polymerase associated protein rapaW04_3017Not AvailablePositive3276567 - 3279458109243.0
ribosomal large subunit pseudouridine synthase aW04_3018Not AvailablePositive3279501 - 328015424941.2
hypothetical proteinW04_3019Not AvailablePositive3280253 - 328110732280.8
dnaj-like protein djlaW04_3020Not AvailableNegative3281104 - 328194331941.4
outer membrane protein imp, required for envelope biogenesisW04_3021Not AvailablePositive3282188 - 328450987573.9
survival protein sura precursorW04_3022Not AvailablePositive3284523 - 328581548085.3
4-hydroxythreonine-4-phosphate dehydrogenaseW04_3023Not AvailablePositive3285821 - 328681335485.0
ssu rrna (adenine(1518)-n(6)/adenine(1519)-n(6)) -dimethyltransferaseW04_3024Not AvailablePositive3286810 - 328761630308.8
apag proteinW04_3025Not AvailablePositive3287636 - 328798913066.2

Displaying genes 3061 – 3070 of 3777 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.