Pseudoalteromonas sp. SW0106-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. SW0106-04 is a rod-shaped bacterium characterized by a single replicon. This species belongs to the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The bacterium has been cataloged under the accession number BCAI00000000.1, providing a reference for genetic and genomic studies. The single replicon indicates a streamlined genetic architecture, which may contribute to its adaptability and survival in various habitats. Pseudoalteromonas species are often associated with marine environments and can be found in association with a variety of substrates, including those in deep-sea ecosystems. The rod shape of Pseudoalteromonas sp. SW0106-04 is typical for this genus, which often exhibits such morphology, allowing for efficient movement and nutrient uptake in aquatic settings. The ecological role of Pseudoalteromonas species includes participation in nutrient cycling and potential interactions with other marine microorganisms, which can have implications for biogeochemical processes in their environments. In conclusion, Pseudoalteromonas sp. SW0106-04's rod shape and single replicon structure may enhance its ecological versatility in marine ecosystems, underscoring the importance of such microorganisms in maintaining the health and functioning of oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. SW0106-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. SW0106-04 DNA, contig: CTG030, whole genome

Gene Summary

Adenine Count

1068616 bp

Thymine Count

1065188 bp

Guanine Count

955115 bp

Cytosine Count

963375 bp

Genome Length

4052294 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
decarboxylase family proteinW04_0137Not AvailableNegative141730 - 14307349961.5
ggdef domain family proteinW04_0138Not AvailableNegative143191 - 14473257926.3
aminopeptidase n family protein containing pdz domainW04_0139Not AvailablePositive144907 - 14667666535.8
glycosyl transferase, family 25W04_0140Not AvailableNegative146716 - 14749229016.7
hypothetical proteinW04_0141Not AvailableNegative147628 - 14813418946.4
phosphoribosyl-amp cyclohydrolaseW04_0142Not AvailableNegative148218 - 14882622417.7
imidazole glycerol phosphate synthase cyclase subunitW04_0143Not AvailableNegative148817 - 14959628293.6
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseW04_0144Not AvailableNegative149578 - 15031226765.6
imidazole glycerol phosphate synthase amidotransferase subunitW04_0145Not AvailableNegative150322 - 15091221598.7
histidinol-phosphataseW04_0146Not AvailableNegative150909 - 15197038637.0

Displaying genes 181 – 190 of 3777 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.