Pseudoalteromonas sp. SW0106-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. SW0106-04 is a rod-shaped bacterium characterized by a single replicon. This species belongs to the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The bacterium has been cataloged under the accession number BCAI00000000.1, providing a reference for genetic and genomic studies. The single replicon indicates a streamlined genetic architecture, which may contribute to its adaptability and survival in various habitats. Pseudoalteromonas species are often associated with marine environments and can be found in association with a variety of substrates, including those in deep-sea ecosystems. The rod shape of Pseudoalteromonas sp. SW0106-04 is typical for this genus, which often exhibits such morphology, allowing for efficient movement and nutrient uptake in aquatic settings. The ecological role of Pseudoalteromonas species includes participation in nutrient cycling and potential interactions with other marine microorganisms, which can have implications for biogeochemical processes in their environments. In conclusion, Pseudoalteromonas sp. SW0106-04's rod shape and single replicon structure may enhance its ecological versatility in marine ecosystems, underscoring the importance of such microorganisms in maintaining the health and functioning of oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. SW0106-04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. SW0106-04 DNA, contig: CTG030, whole genome

Gene Summary

Adenine Count

1068616 bp

Thymine Count

1065188 bp

Guanine Count

955115 bp

Cytosine Count

963375 bp

Genome Length

4052294 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-manno-octulosonate cytidylyltransferaseW04_1686Not AvailablePositive1836062 - 183681127000.3
ribosomal large subunit pseudouridine synthase dW04_1687Not AvailablePositive1836808 - 183747324823.9
csdl protein of the hesa/moeb/thif familyW04_1688Not AvailablePositive1837479 - 183828829687.4
cysteine desulfurase csda-csde, sulfur acceptor protein csdeW04_1689Not AvailableNegative1838285 - 183870115568.8
cysteine desulfurase csda-csde, main protein csdaW04_1690Not AvailableNegative1838698 - 183994545546.6
citrate synthaseW04_1691Not AvailableNegative1840020 - 184130647729.1
succinate dehydrogenase cytochrome b-556 subunitW04_1692Not AvailablePositive1841780 - 184211212052.9
succinate dehydrogenase hydrophobic membrane anchor proteinW04_1693Not AvailablePositive1842103 - 184245012757.1
succinate dehydrogenase flavoprotein subunitW04_1694Not AvailablePositive1842451 - 184422364658.1
succinate dehydrogenase iron-sulfur proteinW04_1695Not AvailablePositive1844235 - 184495126574.1

Displaying genes 1731 – 1740 of 3777 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.