Agrobacterium sp. SUL3

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. SUL3 is a Gram-negative, rod-shaped bacterium that possesses flagella, indicating its capability for motility. This species is characterized by having a single replicon, which suggests a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number for Agrobacterium sp. SUL3 is LGZB00000000.1, which provides a reference point for genomic studies and further research. The presence of flagella in Agrobacterium sp. SUL3 not only facilitates movement but may also play a role in its interactions with plants and other microorganisms in its ecological niche. Agrobacterium species are known for their ability to transfer DNA to plant cells, a trait that has significant implications in biotechnology and agriculture. Understanding the specific traits of Agrobacterium sp. SUL3 can provide insights into its ecological roles, such as its potential to influence plant health, contribute to soil fertility, or participate in phytopathogenic processes. In summary, Agrobacterium sp. SUL3 is a motile, Gram-negative bacterium with a single replicon and a rod shape. Its traits suggest a capacity for diverse ecological interactions, highlighting its potential significance in agricultural microbiology and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. SUL3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. SUL3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Botryococcus braunii
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. SUL3 scf_32201_70.contig_1, whole genome shotgun

Gene Summary

Adenine Count

1215006 bp

Thymine Count

1236613 bp

Guanine Count

1794891 bp

Cytosine Count

1767257 bp

Genome Length

6013800 bp

Protein-coding Genes

5492 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazoleglycerol-phosphate dehydrataseAKG12_09480Not AvailablePositive1856015 - 185661121671.8
hypothetical proteinAKG12_09485Not AvailablePositive1856634 - 185712818155.9
imidazole glycerol phosphate synthaseAKG12_09490Not AvailablePositive1857130 - 185778023190.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAKG12_09495Not AvailablePositive1857782 - 185853126099.5
imidazole glycerol phosphate synthaseAKG12_09500Not AvailablePositive1858528 - 185930427293.5
phosphoribosyl-atp pyrophosphataseAKG12_09505Not AvailablePositive1859320 - 185964311401.6
pantothenate kinaseAKG12_09510Not AvailablePositive1859673 - 186064136964.2
peptidoglycan-binding protein lysmAKG12_09515Not AvailableNegative1860685 - 186113416002.3
peptide chain release factor iAKG12_09520Not AvailableNegative1861221 - 186165515800.1
phosphoenolpyruvate carboxykinaseAKG12_09525Not AvailableNegative1861783 - 186339358060.8

Displaying genes 1861 – 1870 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.