Lysinibacillus sp. F5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Lysinibacillus

Description

Lysinibacillus sp. F5 is characterized by having a single replicon, indicating a streamlined genomic structure common among certain bacterial species. The accession number for this strain is LKIE00000000.1, which serves as a unique identifier for its genomic data in biological databases. This bacterium is part of the genus Lysinibacillus, which includes various species known for their versatility in different environmental conditions. Although specific phenotypic traits and ecological roles of Lysinibacillus sp. F5 are not provided, members of this genus are often recognized for their potential applications in agriculture and bioremediation due to their ability to degrade organic materials and promote plant growth. The presence of a single replicon suggests a level of genomic efficiency, which may confer advantages in resource-limited environments. This trait may facilitate rapid adaptation and survival in diverse ecological niches. Given the ecological significance of Lysinibacillus species, Lysinibacillus sp. F5 could play a role in nutrient cycling and soil health, contributing to the maintenance of ecosystem balance. Further research into its specific metabolic capabilities and ecological interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusLysinibacillus
SpeciesLysinibacillus sp. F5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysinibacillus sp. F5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinibacillus sp. F5 Contig99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1447304 bp

Thymine Count

1400909 bp

Guanine Count

896305 bp

Cytosine Count

829126 bp

Genome Length

4573644 bp

Protein-coding Genes

4167 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAK833_02120Not AvailablePositive394667 - 39598943875.3
hypothetical proteinAK833_02125Not AvailablePositive396013 - 39634812451.9
HolinAK833_02130Not AvailablePositive396578 - 39698514815.6
L-alanyl-d-glutamate peptidaseAK833_02135Not AvailablePositive396982 - 39764424699.3
AttlNot AvailableNot AvailablePositive3765919 - 3765931Not Available
IntegraseAK833_17980B7IFN3Negative3765934 - 376711246169.0
Membrane associated lipoproteinAK833_17985Not AvailableNegative3767223 - 376769018272.9
Immunity repressorAK833_17990Not AvailableNegative3767694 - 376803513184.6
hypothetical proteinAK833_17995Not AvailablePositive3768433 - 37686187091.48
Hypothetical proteinAK833_18000Not AvailableNegative3768590 - 37688359818.57

Displaying genes 11 – 20 of 4302 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

229 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 229 metabolites

Health Effects

No health effects information available for this bacterium.