Psychrobacter sp. P11F6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. P11F6 is a psychrotolerant bacterium characterized by the presence of flagella, which is indicative of its motility. This organism has three replicons, contributing to its genetic diversity and adaptability in various environments. The genomic data for Psychrobacter sp. P11F6 can be found under the accessions NZ_CM003594.1, LJCE00000000.1, and NZ_CM003595.1. The presence of flagella suggests that Psychrobacter sp. P11F6 is capable of movement, which may aid in its survival in cold environments where it is typically found. This motility can facilitate the bacterium's ability to access nutrients and adapt to fluctuating conditions. The three replicons present in its genome can provide functional redundancy or specialized functions that enhance its resilience in diverse ecological niches. In terms of ecological significance, Psychrobacter sp. P11F6 may play a role in nutrient cycling in cold environments, contributing to the microbiome of polar regions, deep-sea habitats, or glacial ice. Its adaptations to low temperatures and motility may allow it to thrive in these extreme conditions, potentially influencing the microbial community structure and biogeochemical processes in those ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. P11F6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. P11F6 chromosome, whole genome shotgun sequence.

Gene Summary

Adenine Count

991643 bp

Thymine Count

992560 bp

Guanine Count

743239 bp

Cytosine Count

739550 bp

Genome Length

3470205 bp

Protein-coding Genes

2792 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
disulfide bond formation protein bAK822_RS00270Q4FVQ0Negative62219 - 6274619388.5
glutamate--cysteine ligaseAK822_RS00275Q0VSY7Negative62817 - 6439159223.6
iron-sulfur cluster insertion protein erpaAK822_RS00280Q4FVP8Negative64741 - 6512113590.4
abc-f family atp-binding cassette domain-containing proteinAK822_RS00285P63390Positive65589 - 6761075467.7
septal ring lytic transglycosylase rlpa family proteinAK822_RS00290Q55752Negative67722 - 6808413172.1
dnaj c-terminal domain-containing proteinAK822_RS00295A9KE65Positive68657 - 6964035205.0
chaperone modulator cbpmAK822_RS00300Not AvailablePositive69733 - 7005612550.0
serine/threonine transporter ssttAK822_RS00305Q4FVP3Negative70149 - 7135141686.2
serine/threonine transporter ssttAK822_RS00310Q1QES0Negative71622 - 7282441515.9
dna polymerase iii subunit chiAK822_RS00315Not AvailableNegative73038 - 7352918329.8

Displaying genes 71 – 80 of 5739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

231 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 231 metabolites

Health Effects

No health effects information available for this bacterium.