Geobacillus sp. PA-3

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Anoxybacillaceae

Genus

Geobacillus

Description

Geobacillus sp. PA-3 is a notable thermophilic bacterium characterized by the presence of flagella, which contribute to its motility in high-temperature environments. This strain has a single replicon, indicating a streamlined genomic architecture that may facilitate efficient replication and adaptability to extreme conditions. The genomic data for Geobacillus sp. PA-3 can be accessed under the accession number LIDX00000000.1. The presence of flagella suggests that Geobacillus sp. PA-3 is capable of active movement, which may be advantageous for colonizing various ecological niches, particularly in thermophilic habitats such as hot springs or geothermal environments. This motility can enhance its ability to obtain nutrients and engage in interactions with other microorganisms, contributing to the dynamics of microbial communities in extreme environments. In summary, Geobacillus sp. PA-3 demonstrates significant traits such as flagella presence and a single replicon, which are indicative of its adaptation to life in high-temperature ecosystems. These features not only highlight its potential ecological role but also suggest avenues for further research into its applications in biotechnology, especially in processes that require thermophilic organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAnoxybacillaceae
GenusGeobacillus
SpeciesGeobacillus sp. PA-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geobacillus sp. PA-3 GEPA3_contig_183, whole genome shotgun

Gene Summary

Adenine Count

932010 bp

Thymine Count

932738 bp

Guanine Count

884750 bp

Cytosine Count

896979 bp

Genome Length

3646477 bp

Protein-coding Genes

2571 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanine dehydrogenaseGEPA3_1989Q59224Negative2037414 - 203855641431.5
2-nitropropane dioxygenaseGEPA3_1990Q9I4V0Negative2038743 - 203969333766.9
putative transferase ytoaGEPA3_1991Not AvailablePositive2039762 - 204031319788.8
hypothetical proteinGEPA3_1992Not AvailableNegative2040281 - 20405058741.8
paax family transcrtiptional regulatorGEPA3_1993P76086Negative2040502 - 204136834316.8
3-oxoadipyl-coa/3-oxo-5,6-dehydrosuberyl-coa thiolaseGEPA3_1994P0C7L2Negative2041613 - 204282443340.4
putative 3-hydroxybutyryl-coa dehydrogenaseGEPA3_1995Not AvailableNegative2042866 - 204372931596.1
putative aldehyde dehydrogenase dhasGEPA3_1996O34660Negative2043921 - 204544154959.1
1,2-epoxyphenylacetyl-coa isomeraseGEPA3_1997P77467Negative2045456 - 204622928264.1
putative enoyl-coa hydratase echa8GEPA3_1998Q52995Negative2046242 - 204701828414.6

Displaying genes 1881 – 1890 of 2674 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

191 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 191 metabolites

Health Effects

No health effects information available for this bacterium.