Pelagibacteraceae bacterium GOM-A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium GOM-A1 is a member of the Pelagibacteraceae family, notable for its single replicon, indicating a streamlined genome structure. The organism is cataloged under the accession number LHBX00000000.1, which allows for its identification and retrieval of genomic information from biological databases. This bacterium is part of a group known for its significant ecological role in marine environments, particularly in oceanic waters where it contributes to the microbial loop and plays a crucial role in carbon cycling. The streamlined nature of Pelagibacteraceae members often correlates with their adaptation to nutrient-poor conditions, allowing them to thrive in oligotrophic marine ecosystems. The presence of Pelagibacteraceae bacterium GOM-A1 highlights the importance of microbial diversity in oceanic habitats and the potential ecological implications of such organisms in biogeochemical processes. Understanding its genomic traits can provide insights into the evolutionary adaptations that enable survival in specific environmental niches.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagibacteraceae bacterium GOM-A1 A1_S1_73, whole genome shotgun

Gene Summary

Adenine Count

469311 bp

Thymine Count

470578 bp

Guanine Count

195776 bp

Cytosine Count

194386 bp

Genome Length

1330051 bp

Protein-coding Genes

1370 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pirinAKH19_00255Not AvailableNegative46087 - 4692331085.0
had family hydrolaseAKH19_00260Not AvailableNegative46929 - 4760626278.2
rna methyltransferaseAKH19_00265Not AvailablePositive47624 - 4832226482.1
cytochrome c oxidase subunit iiAKH19_00270Not AvailablePositive48382 - 4919431052.2
cytochrome c oxidase subunit iAKH19_00275Not AvailablePositive49197 - 5083159832.3
protoheme ix farnesyltransferaseAKH19_00280Not AvailablePositive50858 - 5176634124.8
serine proteaseAKH19_00285Not AvailablePositive51763 - 518884799.2
cytochrome c oxidase assembly proteinAKH19_00290Not AvailablePositive51888 - 5243320368.2
cytochrome b562AKH19_00295Not AvailablePositive52439 - 5323030323.7
surfeit locus protein 1AKH19_00300Not AvailablePositive53237 - 5389025482.7

Displaying genes 51 – 60 of 1402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.