Pelagibacteraceae bacterium GOM-A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium GOM-A1 is a member of the Pelagibacteraceae family, notable for its single replicon, indicating a streamlined genome structure. The organism is cataloged under the accession number LHBX00000000.1, which allows for its identification and retrieval of genomic information from biological databases. This bacterium is part of a group known for its significant ecological role in marine environments, particularly in oceanic waters where it contributes to the microbial loop and plays a crucial role in carbon cycling. The streamlined nature of Pelagibacteraceae members often correlates with their adaptation to nutrient-poor conditions, allowing them to thrive in oligotrophic marine ecosystems. The presence of Pelagibacteraceae bacterium GOM-A1 highlights the importance of microbial diversity in oceanic habitats and the potential ecological implications of such organisms in biogeochemical processes. Understanding its genomic traits can provide insights into the evolutionary adaptations that enable survival in specific environmental niches.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagibacteraceae bacterium GOM-A1 A1_S1_73, whole genome shotgun

Gene Summary

Adenine Count

469311 bp

Thymine Count

470578 bp

Guanine Count

195776 bp

Cytosine Count

194386 bp

Genome Length

1330051 bp

Protein-coding Genes

1370 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAKH19_01265Not AvailablePositive218319 - 21896625022.9
hypothetical proteinAKH19_01270Not AvailablePositive218969 - 21984133900.2
multidrug transporter mateAKH19_01275Not AvailablePositive219846 - 22119550388.8
sarcosine oxidase subunit gammaAKH19_01280Not AvailableNegative221169 - 22171720988.9
sarcosine oxidase subunit alphaAKH19_01285Not AvailableNegative221710 - 224712112730.0
sarcosine oxidase subunit deltaAKH19_01290Not AvailableNegative224712 - 22499310984.0
sarcosine oxidase subunit betaAKH19_01295Not AvailableNegative224996 - 22624945684.7
Trna-serNot AvailableNot AvailablePositive226314 - 226408Not Available
hypothetical proteinAKH19_01305Not AvailableNegative226421 - 22809465856.6
lytic transglycosylaseAKH19_01310Not AvailableNegative228097 - 23029885900.1

Displaying genes 251 – 260 of 1402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.